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List of Papers
Hirofumi Ichinose Last modified date：2023.11.27

Associate Professor / Biomaterial Science / Department of Agro-environmental Sciences / Faculty of Agriculture


Papers
1. Natsuki Masunaga, Takuya Kitaoka, Hirofumi Ichinose, Biocatalyst collection and heterologous expression of sesquiterpene synthases from basidiomycetous fungi: Discovery of a novel sesquiterpene hydrocarbon, Microbial Biotechnology, 10.1111/1751-7915.14204, 16, 3, 632-644, 2023.03.
2. Dani Permana, Ksenia Niesel, Mark James Ford, Hirofumi Ichinose, Latent Functions and Applications of Cytochrome P450 Monooxygenases from Thamnidium elegans: A Novel Biocatalyst for 14α-Hydroxylation of Testosterone, ACS Omega, doi: 10.1021/acsomega.2c00430, 7, 13932-13941, 2022.04.
3. Hirofumi Ichinose, Shota Ukeba, Takuya Kitaoka, Latent potentials of the white-rot basidiomycete Phanerochaete chrysosporium responsible for sesquiterpene metabolism: CYP5158A1 and CYP5144C8 decorate (E)-α-bisabolene, Enzyme Microb Technol, doi: 10.1016/j.enzmictec.2022.110037, 158, 110037, 2022.08.
4. Diego M. Mendoza, Hirofumi Ichinose, Kojo T. Konadu, Keiko Sasaki, Degradation of powder activated carbon by lactase-mediator system: Model experiments for the improvement of gold recovery from carbonaceous gold ore, JournalJournal of Environmental Chemical Engineering, doi: 10.1016/j.jece.2021.106375, 9, 6, 106375, 2021.12.
5. Toshio Mori, Haruka Ohno, Hirofumi Ichinose, Hirokazu Kawagishi, Hirofumi Hirai, White-rot fungus Phanerochaete chrysosporium metabolizes chloropyridinyl-type neonicotinoid insecticides by an N-dealkylation reaction catalyzed by two cytochrome P450s, J Hazard Mater, doi: 10.1016/j.jhazmat.2020.123831, 402, 123831, 2021.01.
6. Mayumi Hatakeyama, Daisuke Ryuno, Shingo Yokota, Hirofumi Ichinose, Takuya Kitaoka, One-step synthesis of cellooligomer-conjugated gold nanoparticles in a water-in-oil emulsion system and their application in biological sensing, Colloids Surf B Biointerfaces, doi: 10.1016/j.colsurfb.2019.02.051, 178, 74-79, 2019.06.
7. Jianqiao Wang, Haruka Ohno, Yuuri Ide, Hirofumi Ichinose, Toshio Mori, Hirokazu Kawagishi, Hirofumi Hirai, Identification of the cytochrome P450 involved in the degradation of neonicotinoid insecticide acetamiprid in Phanerochaete chrysosporium, J Hazard Mater, doi: 10.1016/j.jhazmat.2019.03.042, 371, 494-498, 2019.06.
8. Mayumi Hatakeyama, Fumi Nakada, Hirofumi Ichinose, Takuya Kitaoka, Direct stimulation of cellular immune response via TLR2 signaling triggered by contact with hybrid glyco-biointerfaces composed of chitohexaose and cellohexaose, Colloids Surf B Biointerfaces, doi: 10.1016/j.colsurfb.2018.12.039, 175, 517-522, 2019.03.
9. Kiyota Sakai, Fumiko Matsuzaki, Lisa Wise, Yu Sakai, Sadanari Jindou, Hirofumi Ichinose, Naoki Takaya, Masashi Kato, Hiroyuki Wariishi, Motoyuki Shimizu, Biochemical Characterization of CYP505D6, a Self-Sufficient Cytochrome P450 from the White-Rot Fungus Phanerochaete chrysosporium, Appl Environ Microbiol, doi: 10.1128/AEM.01091-18, 84, 22, e01091, 2018.10.
10. Hirofumi Ichinose, Takuya Kitaoka, Insight into metabolic diversity of the brown-rot basidiomycete Postia placenta responsible for sesquiterpene biosynthesis: semi-comprehensive screening of cytochrome P450 monooxygenase involved in protoilludene metabolism, Microbial Biotechnology, 10.1111/1751-7915.13304, 11, 952-965, 2018.07.
11. Hatakeyama Mayumi, Ichinose Hirofumi, Takuya Kitaoka, Impacts of amino acid substitutions in fungal cytochrome P450 monooxygenase (CYP57B3) on the effective production of 3'-hydroxygenistein, FEMS Microbiology Letters, https://doi.org/10.1093/femsle/fnx107, 364, 11, FEMS Microbiology Letters, Volume 364, Issue 11, 15 June 2017, fnx107, 2017.05.
12. Lili Jia, Kosuke Minamihata, Hirofumi Ichinose, Kouhei Tsumoto, Noriho Kamiya , Polymeric SpyCatcher Scaffold Enables Bioconjugation in a Ratio-Controllable Manner, Biotechnol J, doi: 10.1002/biot.201700195, 12, 12, 2017.12.
13. 一瀬博文, 畠山真由美, 山内幸代, Sequence modifications and heterologous expression of eukaryotic cytochromes P450 in Escherichia coli, J Biosci Bioeng, doi: 10.1016/j.jbiosc.2015.01.019., 120, 2, 268-274, J Biosci Bioeng. 2015 Sep;120(3):268-74. doi: 10.1016/j.jbiosc.2015.01.019., 2015.09.
14. Pornthida Poosala, Hirofumi Ichinose, Takuya Kitaoka, Spatial Geometries of Self-Assembled Chitohexaose Monolayers Regulate Myoblast Fusion, Int J Mol Sci, doi: 10.3390/ijms17050686, 17, 5, 686, 2016.05.
15. Ryuya Fujii, Takahiro Ugai, Hirofumi Ichinose, Mayumi Hatakeyama, Takuto Kosaki, Katsuya Gomi, Isao Fujii, Atsushi Minami, Hideaki Oikawa , Reconstitution of biosynthetic machinery of fungal polyketides: unexpected oxidations of biosynthetic intermediates by expression host, Biosci Biotechnol Biochem, doi: 10.1080/09168451.2015.1104234, 80, 3, 426-431, 2016.03.
16. Hatakeyama Mayumi, Ichinose Hirofumi, Takuya Kitaoka, Heterologous expression of fungal cytochromes P450 (CYP5136A1 and CYP5136A3) from the white-rot basidiomycete Phanerochaete chrysosporium: functionalization with cytochrome b5 in Escherichia coli, Enzyme and Microbial Technology, DOI: 10.1016/j.enzmictec.2016.03.004, 89, 2, 7-14, Enzyme and Microbial Technology, 89(-), 7-14 (2016), 2015.09.
17. Gonçalves GA, Takasugi Y, Mori Y, Tanaka T, Noda S, Hirofumi Ichinose, Noriho Kamiya, Effect of pretreatment methods on the synergism of cellulase and xylanase during the hydrolysis of bagasse, Biores Technol, 185, 158-164, 2015.06.
18. Gonçalves GA, Takasugi Y, Mori Y, Tanaka T, Noda S, Hirofumi Ichinose, Noriho Kamiya, Synergistic effect and application of xylanases as accessory enzymes to enhance the hydrolysis of pretreated bagasse, Enz Microb Technol, 72, 16-24, 2015.05.
19. Hirofumi Ichinose, Hiroyuki Wariishi, High-level heterologous expression of fungal cytochrome P450s in Escherichia coli, Biochem Biophys Res Commun, 438, 289-294, 2013.09.
20. Ide M, Ichinose H, Wariishi H., Molecular identification and functional characterization of cytochrome P450 monooxygenases from the brown-rot basidiomycete Postia placenta, Arch Microbiol, 194, 243-253, 2012.04.
21. Nakamura T, Ichinose H, Wariishi H., Flavin-containing monooxygenases from Phanerochaete chrysosporium responsible for fungal metabolism of phenolic compounds., Biodegradation, 23, 343-350, 2012.04.
22. Hirofumi Ichinose, Noriho Kamiya, Aligning an endoglucanase Cel5A from Thermobifida fusca on a DNA scaffold: potent design of an artificial cellulosome, Chem Commun (Camb), 49, 6971-6973, 2012.04.
23. Ichinose H, Wariishi H., Heterologous expression and mechanistic investigation of a fungal cytochrome P450 (CYP5150A2): Involvement of alternative redox partners., Arch Biochem Biophys, 518, 8-15, 2012.01.
24. Nazmul Hussain Nazir KHM, Ichinose H, Wariishi H., Construction and Application of a Functional Library of Cytochrome P450 Monooxygenases from the Filamentous Fungus Aspergillus oryzae, Appl Environ Microbiol, 77, 3147-3150, 2011.05.
25. Yamamoto K, Ichinose H, Aso Y, Banno Y, Kimura M, Nakashima T., Molecular characterization of an insecticide-induced novel glutathione transferase in silkworm, Biochim Biophys Acta, 1810, 4, 420-426, 2011.04.
26. Hirosue S, Tazaki M, Hiratsuka N, Yanai S, Kabumoto H, Shinkyo R, Arisawa A, Sakaki T, Tsunekawa H, Johdo O, Ichinose H, Wariishi H., Insight into functional diversity of cytochrome P450 in the white-rot basidiomycete Phanerochaete chrysosporium: Involvement of versatile monooxygenase, Biochem Biophys Res Commun, 407, 118-123, 2011.04.
27. Chigu NL, Hirosue S, Nakamura C, Teramoto H, Ichinose H, Wariishi H., Cytochrome P450 monooxygenases involved in anthracene metabolism by the white-rot basidiomycete Phanerochaete chrysosporium, Appl. Microbiol. Biotechnol., 87, 5, 1907-16, 2010.08.
28. Nazmul Hussain Nazir KHM, Ichinose H, Wariishi H., Molecular characterization and isolation of cytochrome P450 genes from the filamentous fungus Aspergillus oryzae, Arch Microbiol. , 192, 395-408, 2010.05.
29. Nakamura T, Ichinose H, Wariishi H, Cloning and heterologous expression of two aryl-aldehyde dehydrogenases from the white-rot basidiomycete Phanerochaete chrysosporium, Biochem Biophys Res Commun, 394, 470-475, 2010.04.
30. Kasai N, Ikushiro S, Shinkyo R, Yasuda K, Hirosue S, Arisawa A, Ichinose H, Wariishi H, Sakaki T., Metabolism of mono- and dichloro-dibenzo-p-dioxins by Phanerochaete chrysosporium cytochromes P450, Appl Microbiol Biotechnol, 86, 773-780, 2010.03.
31. Miki Y, Ichinose H, Wariishi H, Molecular characterization of lignin peroxidase from the white-rot basidiomycete Trametes cervina: a novel fungal peroxidase, FEMS Microbiol Lett., 304, 39-46, 2010.03.
32. Kasai N, Ikushiro S, Hirosue S, Arisawa A, Ichinose H, Uchida Y, Wariishi H, Ohta M, Sakaki T, Atypical kinetics of cytochromes P450 catalysing 3'-hydroxylation of flavone from the white-rot fungus Phanerochaete chrysosporium, J Biochem., 147, 117-125, 2010.01.
33. T. Mouri, T. Shimizu, N. Kamiya, H. Ichinose, M. Goto, Design of a cytochrome P450BM3 reaction system linked by two-step cofactor regeneration catalyzed by a soluble transhydrogenase and glycerol dehydrogenase, Biotechnology Progress, 25, 1372-1378, 2009.09.
34. Kasai N, Ikushiro S, Hirosue S, Arisawa A, Ichinose H, Wariishi H, Ohta M, Sakaki T, Enzymatic properties of cytochrome P450 catalyzing 3'-hydroxylation of naringenin from the white-rot fungus Phanerochaete chrysosporium, Biochem Biophys Res Commun, 387, 103-108, 2009.09.
35. M. Kitaoka, H. Ichinose, M. Goto, Simultaneous visual detection of single-nucleotide variations in tuna DNA using DNA/RNA chimeric probes and ribonucleaseA , Analytical Biochemistry, 389, 6-11, 2009.04.
36. M. Kitaoka, N. Okamura, H. Ichinose, M. Goto, Detection of SNPs in Fish DNA: Application of the Fluorogenic Ribonuclease Protection (FRIP) Assay for the Authentication of Food Contents, J. Agric. Food Chem., 56, 6246-6251 (2008)., 2008.12.
37. N.Kamiya, S.Doi, Y.Tanaka, H.Ichinose, M.Goto,, Functional immobilization of recombinant alkaline phosphatases bearing a glutamyl donor substrate peptide of microbial transglutaminase, J. Biosci. Bioeng., 104, 195-199 (2007), 2007.01.
38. T. Maruyama, C. Komatsu, J. Michizoe, H. Ichinose & M. Goto, Laccase-mediated oxidative degradation of the herbicide dymron, Biotechnol. Prog., 22, 426-430, 2006.01.
39. T. Maruyama, T. Shinohara, T. Hosoki, H. Ichinose, N. Kamiya and M. Goto, Masking oligonucleotides improve sensitivity of mutation detection based on guanine quenching, Anal Biochem 354, 8-14, 2006.01.
40. Mouri T, Michizoe J, Ichinose H, Kamiya N, & Goto M., A recombinant Escherichia coli whole cell biocatalyst harboring a cytochrome P450cam monooxygenase system coupled with enzymatic cofactor regeneration, Appl Microbiol Biotechnol., 19, 1-7, 2006.01.
41. Ichinose H., Kitaoka M., Okamura N., Maruyama T., Kamiya N. & Goto M., Detection of single-base mutants by fluorogenic ribonuclease protection assay, Anal. Chem., 10.1021/ac050782k, 77, 21, 7047-7053, 77, 7047-7053, 2005.11.
42. Maruyama T., Shinohara T., Ichinose H., Kitaoka M., Okamura N., Kamiya N. & Goto M., Mutation detection in DNA oligonucleotides based on a guanine quenching method coupled with enzymatic digestion of single-stranded DNA, Biotechnol. Lett., 10.1007/s10529-005-3681-x, 27, 18, 1349-1354, 27, 1349-1354, 2005.09.
43. Ichinose H., Kamiya N. & Goto M., Enzymatic redox cofactor regeneration in organic media: Functionalization and application of glycerol dehydrogenase and soluble transhydrogenase in reverse micelles, Biotechnol. Prog., 10.1021/bp0500765, 21, 4, 1192-1197, 21, 1192-1197, 2005.07.
44. Tominaga J., Kamiya N., Doi S., Ichinose H., Maruyama T. & Goto M., Design of a specific peptide tag that affords covalent and site-specific enzyme immobilization catalyzed by microbial transglutaminase, Biomacromolecules, 10.1021/bm050193o, 6, 4, 2299-2304, 6, 2299-2304, 2005.07.
45. Michizoe J, Ichinose H., Kamiya N., Maruyama T. & Goto M., Biodegradation of phenolic environmental pollutants by a surfactant-laccase complex in organic media, J. Biosci. Bioeng., 10.1263/jbb.99.642, 99, 6, 642-647, 99, 642-647, 2005.06.
46. Maruyama T., Takata T., Ichinose H., Kamiya N., Kuma H., Hamasaki N., Morita H. & Goto M., Detection of point mutations in the HBV polymerase gene using a fluorescence intercalator in reverse micelles, Biotechnol. Prog., 10.1021/bp0496474, 21, 2, 575-579, 21, 575-579, 2005.03.
47. Kamiya N., Doi S., Tominaga J., Ichinose H. & Goto M., Transglutaminase-mediated protein immobilization to casein nanolayers created on a plastic surface, Biomacromolecules, 10.1021/bm0494895, 6, 1, 35-38, 6, 35-38, 2005.01.
48. Michizoe J., Ichinose H., Kamiya N., Maruyama T., & Goto M., Functionalization of the cytochrome P450cam monooxygenase system in the cell-like aqueous compartments of water-in-oil emulsions, J. Biosci. Bioeng., 10.1263/jbb.99.012, 99, 1, 12-17, 99, 12-17, 2005.01.
49. Sakono M., Kawashima Y., Ichinose H., Maruyama T., Kamiya N. & Goto M., Direct refolding of inclusion bodies using reversed micelles, Biotechnol. Prog., 10.1021/bp049887j, 20, 6, 1783-1787, 20, 1783-1787, 2004.11.
50. Ichinose H., Michizoe J., Maruyama T., Kamiya N. & Goto M., Electron transfer reactions and functionalization of cytochrome P450cam monooxygenase system in reverse micelles, Langmuir, 10.1021/la049752n, 20, 13, 5564-5568, 20, 5564-5568, 2004.06.
51. Michizoe J., Uchimura Y., Ichinose H., Maruyama T., Kamiya N., Wariishi H., Furusaki S. & Goto M., Activation of manganese peroxidase in an organic medium using a mediator, Biochem. Eng. J., 10.1016/j.bej.2003.09.008, 19, 1, 43-46, 19, 43-46, 2004.01.
52. Tominaga J., Kamiya N., Doi S., Ichinose H. & Goto M., A novel enzymatic strategy for site-specific immobilization of functional proteins using microbial transglutaminase, Enz. Microb. Technol., 35, 613-618, 2004.01.
53. Tominaga J., Michizoe J., Kamiya N. Ichnose H., Maruyama T. & Goto M., Factors affecting oxidative activiy of hydroxyl group of laccase towards biphenyl derivatives in a homogeneous aqueous-nonaqueous systems, J. Biosci. Bioeng., 98, 14-19, 2004.01.
54. Maruyama T., Takata T., Ichinose H., Park L., Kamaiya N. & Goto M., Simple detection of point mutations in DNA oligonucleotides using SYBR Green I, Biotechnol. Lett., 10.1023/A:1025661730518, 25, 19, 1637-1641, 25, 1637-1641, 2003.10.
55. Sakono M., Ichinose H., & Goto M, Protein refolding in nanostructured reversed micelles including a molecular chaperone, J. Biosci. Bioeng., 10.1016/S1389-1723(03)80193-7, 96, 3, 275-278, 96, 275-278, 2003.01.
56. Ichinose H., Wariishi H. & Tanaka H., Identification and characterization of novel cytochrome P450 genes from white-rot basidiomycete Coriolus versicolor, Appl. Microbiol. Biotechnol., 58, 1, 97-105, 58, 97-105, 2002.01.
57. Ichinose H., Wariishi H. & Tanaka H., Effective oxygen transfer reaction catalyzed by microperoxidase-11 during sulfur oxidation of dibenzothiophene, Enz. Microb. Technol., 10.1016/S0141-0229(01)00514-2, 30, 3, 334-339, 30, 334-339, 2002.01.
58. Ichinose H., Nakamizo M., Wariishi H. & Tanaka H., Metabolic response against sulfur-containing heterocyclic compounds by lignin-degrading basidiomycete Coriolus versicolor, Appl. Microbiol. Biotechnol., 10.1007/s00253-001-0926-z, 58, 4, 517-526, 58, 517-526, 2002.01.
59. Ichinose H., Wariishi H. & Tanaka H., Molecular analysis of arylalcohol dehydrogenase of Coriolus versicolor exposed against exogenous addition of dibenzothiophene, J. Basic Microbiol., 10.1002/1521-4028(200210)42:53.0.CO;2-F, 42, 5, 327-336, 42, 329-338, 2002.01.
60. Ichinose H., Wariishi H. & Tanaka H., Identification and heterologous expression of the cytochrome P450 oxidoreductase from the white-rot basidiomycete Coriolus versicolor, Appl. Microbiol. Biotechnol., 10.1007/s00253-002-1083-8, 59, 6, 658-664, 59, 658-664, 2002.01.
61. Ichinose H., Wariishi H. & Tanaka H., Bioconversion of recalcitrant 4-methyldibenzothiophene to water-extractable products using lignin-degrading basidiomycete Coriolus versicolor, Biotechnol. Prog., 10.1021/bp990082z, 15, 4, 706-714, 15, 706-714, 1999.01.
62. Itoh N., Yoshida M., Miyamoto T., Ichinose H., Wariishi H. & Tanaka H., Fungal cleavage of thioether bond found in Yperite, FEBS Lett., 10.1016/S0014-5793(97)00812-0, 412, 2, 281-284, 412, 281-284, 1997.01.


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