Updated on 2025/06/09

Information

 

写真a

 
MATSUMOTO ATSUSHI
 
Organization
Faculty of Medical Sciences Department of Basic Medicine Assistant Professor
School of Medicine Department of Medicine(Concurrent)
Graduate School of Systems Life Sciences Department of Systems Life Sciences(Concurrent)
Title
Assistant Professor
Profile
上皮細胞における脂質機能の解析、及び脂質研究手法の開発
External link

Research Areas

  • Life Science / Cell biology

Degree

  • Doctor of philosophy (University of Tokyo, Japan)

Research History

  • Kyushu University Faculty of Medical Sciences Department of Basic Medicine  Assistant Professor 

    2024.12 - Present

  • Kyushu University 理学研究院 Assistant Professor 

    2024.4 - 2024.11

Education

  • The University of Tokyo   理学系研究科   生物科学専攻

    2018.4 - 2021.3

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    Country:Japan

Research Interests・Research Keywords

  • Research theme: Development of techniques for lipid manipulation and observation and analyses of lipid function using epithelial cells.

    Keyword: epithelial cell, lipid, alcohol, raft, membrane biophysics

    Research period: 2024.4

Papers

  • A rapid and simple spectroscopic method for the determination of yeast cell viability using methylene blue Reviewed International journal

    Atsushi Matsumoto, Ichiro Terashima, Yukifumi Uesono

    Yeast   39 ( 11-12 )   607 - 616   2022.10   ISSN:0749-503X eISSN:1097-0061

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Wiley  

    DOI: 10.1002/yea.3819

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  • Escaping from the Cutoff Paradox by Accumulating Long-Chain Alcohols in the Cell Membrane Reviewed International journal

    Atsushi Matsumoto, Hiroyuki Adachi, Ichiro Terashima, Yukifumi Uesono

    Journal of Medicinal Chemistry   65 ( 15 )   10471 - 10480   2022.7   ISSN:0022-2623 eISSN:1520-4804

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:American Chemical Society ({ACS})  

    The mechanism for the cutoff, an activity cliff at which long-chain alcohols lose their biological effects, has not been elucidated. Highly hydrophobic oleyl alcohol (C18:1) exists as a mixture of monomers and aggregated droplets in water. C18:1did not inhibit the yeast growth but inhibited the growth of the slime mold without a cell wall. C18:1exhibited toxicity to the yeast protoplast, which was enhanced by polyethylene glycol, a fusogen. Therefore, direct interactions of C18:1with the membrane are crucial for the toxicity. The cutoff alcohols, C14and C16, also exhibited strong toxicity obeying the Meyer-Overton correlation, in intact yeast cells whose membrane growth was suppressed in water. Taken together, the cutoff is avoidable by securing sufficient accumulation of the wall-permeable monomers in the membrane, which supports the lipid theory. It would be important to distinguish the effective drug structure localizing in the membrane and deal with the amount in the membrane.

    DOI: 10.1021/acs.jmedchem.2c00629

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  • Physicochemical Solubility of and Biological Sensitivity to Long-Chain Alcohols Determine the Cutoff Chain Length in Biological Activity. Reviewed International journal

    Atsushi Matsumoto, Yukifumi Uesono

    Molecular Pharmacology   2018.10

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    Language:Others   Publishing type:Research paper (scientific journal)  

    The cutoff phenomenon associated with the effectiveness of long-chain alcohols in the induction of anesthesia is also observed for various antimicrobial activities, although the mechanism has remained unknown for over eight decades. The minimum inhibitory concentrations at 25°C for budding yeast growth exponentially decreased with increasing chain length of n-alcohols (C2-C12), whereas alcohols ≥C13 lost the inhibitory effect. Thus, growth inhibition by n-alcohols obeys the Meyer-Overton correlation up to C12 and exhibits a cutoff phenomenon. The densities of n-alcohols are low, and the melting point and hydrophobicity increase with chain length. C13 and C14 inhibited yeast growth at 39.8°C, above their melting points. Alcohols ≤C14 inhibited thermophilic bacterial growth at 50°C, whereas C16 inhibited it at 67.5°C, above their melting points. Thus, the high melting points of long-chain alcohols contribute to the cutoff phenomenon. C14 did not effectively inhibit yeast growth in a static culture at 39.8°C, in contrast to a shaking culture, in which the low density-dependent concentration gradient was eliminated. The duration of the transient growth inhibition of yeast by C12 was prolonged by sonication, which prevented hydrophobic aggregation. Therefore, a nonuniform distribution owing to low density and high hydrophobicity contributes to the cutoff. C14 inhibited the growth at 25°C of the pdr1,3,5 mutant, defective in multidrug efflux pumps, whereas C12 did not inhibit the growth of yeast overexpressing PDR5, indicating that the sensitivity to long-chain alcohols contributed to the cutoff. A balance between the physicochemical solubility of and the biological sensitivity to long-chain alcohols determines the cutoff chain length.

    DOI: 10.1124/mol.118.112656

  • D-π-A Fluorophores with Strong Solvatochromism for Single-Molecule Ratiometric Thermometers.

    Hori A, Matsumoto A, Ikenouchi J, Konishi GI

    Journal of the American Chemical Society   147 ( 11 )   9953 - 9961   2025.3   ISSN:0002-7863 eISSN:1520-5126

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    Language:English   Publisher:Journal of the American Chemical Society  

    Fluorescence thermometry has emerged as a significant area of research in the field of remote temperature sensing with high accuracy. However, the development of noninvasive and reliable small organic fluorescence thermometers (FTs) remains challenging. In this study, we developed a high-sensitivity, high-resolution small organic ratiometric FT with a solvatochromic dye and analyzed its temperature response mechanism. π-Extended fluorene-based D−π-A-type small solvatochromic dyes (FπAc, FπF, and FπVC) were synthesized and characterized. A significant solvatochromic shift of >200 nm was observed between n-hexane and tetrahydrofuran (THF) for both FπF and FπVC, with emission in THF reaching the red region (701 nm, 828 nm). This substantial solvatochromic shift was accompanied by a concurrent decrease in the fluorescence quantum yield and is attributable to accelerated internal conversion. The fluorescence spectra of FπF in THF and FπVC in diethyl ether exhibited blue shifts and increased fluorescence intensities with a decrease in polarity at increased temperatures. Our observations revealed an absolute sensitivity of 21%/°C and a relative sensitivity of 3.0%/°C at the maximum. These results represent the highest sensitivity and resolution reported for single fluorophore small organic ratiometric FTs dispersed in solution. The positive temperature coefficient of the fluorescence intensity was attributed to control of the nonradiative decay pathway by solvatochromism. The temperature responsiveness of FπF could be detected in living HeLa cells by ratiometric confocal microscopy. Using the proposed strategy to develop FTs, we plan to build a library of FTs that will cover various environments of interest in both simple and complex systems.

    DOI: 10.1021/jacs.5c01173

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  • Establishment of the Meyer-Overton correlation in an artificial membrane without protein

    Matsumoto, A; Uesono, Y

    BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS   1868 ( 11 )   130717   2024.11   ISSN:0304-4165 eISSN:1872-8006

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    Language:English   Publisher:Biochimica et Biophysica Acta - General Subjects  

    Background: The potency of anesthetics with various structures increases exponentially with lipophilicity, which is the Meyer-Overton (MO) correlation discovered over 120 years ago. The MO correlation was also observed with various biological effects and chemicals, including alcohols; thus, the correlation represents a fundamental relationship between chemicals and organisms. The MO correlation was explained by the lipid and protein theories, although the principle remains unknown because these are still debating. Methods: The gentle hydration method was used to form giant unilamellar vesicles (GUVs) consisting of high- and low-melting phospholipids and cholesterol in the presence of n-alcohols (C2-C12). Confocal fluorescence microscopy was used to determine the percentage of GUVs with domains in relation to the n-alcohol concentrations. Results: n-Alcohols inhibited the domain formation of GUVs, and the half inhibitory concentration (IC50) in the aqueous phase (Cw) decreased exponentially with increasing chain length (lipophilicity). In contrast, the membrane concentrations (Cm) of alcohols for the inhibition, which is a product of the membrane-water partition coefficient and the IC50 values, remained constant irrespective of the chain length. Conclusions: The MO correlation is established in GUVs, which supports the lipid theory. When alcohols reach the same critical concentration in the membrane, similar biological effects appear irrespective of the chain length, which is the principle underlying the MO correlation. General significance: The protein theory states that a highly lipophilic compound targets minor membrane proteins due to the low Cw. However, our lipid theory states that the compound targets various membrane proteins due to the high Cm.

    DOI: 10.1016/j.bbagen.2024.130717

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  • Fluorescent Solvatochromic Probes for Long‐Term Imaging of Lipid Order in Living Cells

    Takuya Tanaka, Atsushi Matsumoto, Andery S. Klymchenko, Eiji Tsurumaki, Junichi Ikenouchi, Gen-ichi KONISHI

    Advanced Science   11 ( 17 )   e2309721   2024.3   ISSN:2198-3844 eISSN:2198-3844

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Advanced Science  

    Abstract
    High‐resolution spatio‐temporal monitoring of the cell membrane lipid order provides visual insights into the complex and sophisticated systems that control cellular physiological functions. Solvatochromic fluorescent probes are highly promising noninvasive visualization tools for identifying the ordering of the microenvironment of plasma membrane microdomains. However, conventional probes, although capable of structural analysis, lack the necessary long‐term photostability required for live imaging at the cellular level. Here, an ultra‐high‐light‐resistant solvatochromic fluorescence probe, 2‐<jats:italic>N</jats:italic>,<jats:italic>N</jats:italic>‐diethylamino‐7‐(4‐methoxycarbonylphenyl)‐9,9‐dimethylfluorene (FπCM) is reported, which enables live lipid order imaging of cell division. This probe and its derivatives exhibit sufficient fluorescence wavelengths, brightness, polarity responsiveness, low phototoxicity, and remarkable photostability under physiological conditions compared to conventional solvatochromic probes. Therefore, these probes have the potential to overcome the limitations of fluorescence microscopy, particularly those associated with photobleaching. FπCM probes can serve as valuable tools for elucidating mechanisms of cellular processes at the bio‐membrane level.

    DOI: 10.1002/advs.202309721

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  • Backward multiplex coherent anti-Stokes Raman (CARS) spectroscopic imaging with electron-multiplying CCD (EM-CCD) camera

    Yusuke Murakami, Minami Yoshimura, W. J. Niels Klement, Atsuki Oda, Ryo Sakamoto, Miho Yakabe, Atsushi Matsumoto, Ryosuke Oketani, Philippe Leproux, Junichi Ikenouchi, Wesley R. Browne, Hideaki Kano

    Optics Continuum   2 ( 9 )   2044 - 2044   2023.9   ISSN:2770-0208 eISSN:2770-0208

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Optica Publishing Group  

    <jats:p>A multiplex CARS imaging system, equipped with an EM-CCD camera, was developed to improve the sensitivity of backward CARS imaging in biological analysis using an inverted microscope. The signal-to-noise ratio was improved by a factor of ca. 3 compared to a conventional CCD mode through the use of EM gain. When imaging epithelial cells in the backward CARS configuration, intracellular organelles such as lipid droplets and nuclei were spectroscopically identified with an exposure time of only 100 ms/pixel.</jats:p>

    DOI: 10.1364/optcon.497869

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  • Antimalarial Quinacrine and Chloroquine Lose Their Activity by Decreasing Cationic Amphiphilic Structure with a Slight Decrease in pH. Reviewed International journal

    Tomohisa Kitagawa, Atsushi Matsumoto, Ichiro Terashima, Yukifumi Uesono

    Journal of Medicinal Chemistry   2021.3

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    Language:English   Publishing type:Research paper (scientific journal)  

    Quinacrine (QC) and chloroquine (CQ) have antimicrobial and antiviral activities as well as antimalarial activity, although the mechanisms remain unknown. QC increased the antimicrobial activity against yeast exponentially with a pH-dependent increase in the cationic amphiphilic drug (CAD) structure. CAD-QC localized in the yeast membranes and induced glucose starvation by noncompetitively inhibiting glucose uptake as antipsychotic chlorpromazine (CPZ) did. An exponential increase in antimicrobial activity with pH-dependent CAD formation was also observed for CQ, indicating that the CAD structure is crucial for its pharmacological activity. A decrease in CAD structure with a slight decrease in pH from 7.4 greatly reduced their effects; namely, these drugs would inefficiently act on falciparum malaria and COVID-19 pneumonia patients with acidosis, resulting in resistance. The decrease in CAD structure at physiological pH was not observed for quinine, primaquine, or mefloquine. Therefore, restoring the normal blood pH or using pH-insensitive quinoline drugs might be effective for these infectious diseases with acidosis.

    DOI: 10.1021/acs.jmedchem.0c02056

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Presentations

Professional Memberships

  • 日本細胞生物学会

Research Projects

  • 膜物性プローブを利用した上皮細胞の脂質恒常性維持機構とその意義の解明

    Grant number:25K18465  2025.4 - 2027.3

    Grants-in-Aid for Scientific Research  Grant-in-Aid for Early-Career Scientists

    松本 惇志

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    Grant type:Scientific research funding

    CiNii Research

  • 形質膜の脂質秩序性を可視化する新規プローブの開発

    2022 - 2023

    令和4(2022)年度理学研究院若手支援令和1号資金支援

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    Authorship:Principal investigator  Grant type:On-campus funds, funds, etc.

  • 麻酔薬を用いた上皮細胞膜構造の形成機構の解析

    Grant number:22KJ2374  2021 - 2023

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for JSPS Fellows

    松本 惇志

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    Authorship:Principal investigator  Grant type:Scientific research funding

    麻酔薬は動物の麻酔だけでなく、微生物の増殖阻害など様々な生物作用を示すが、作用機構は未解明である。これまでの研究から、麻酔薬は脂質を介して様々な生物作用を引き起こす可能性が示唆されている。一方、細胞における脂質の役割は十分に明らかになっていない。そこで本研究では、明確な細胞膜構造を持ち観察に適する上皮細胞を用いて、麻酔薬の作用と、脂質組成や脂質分布変化との関連を詳細に調べることで、麻酔薬が細胞の脂質にどのような変化を引き起こし、どのような細胞現象に影響しうるのかの解明を目指す。

    CiNii Research

  • 人工膜と出芽酵母を用いた麻酔薬による膜ラフト形成阻害作用の解析

    Grant number:19J13923  2019 - 2020

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for JSPS Fellows

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    Authorship:Principal investigator  Grant type:Scientific research funding