Updated on 2025/07/01

Information

 

写真a

 
ISOBE TAICHI
 
Organization
Faculty of Medical Sciences Department of Basic Medicine Assistant Professor
Faculty of Medical Sciences Center for Cohort Studies(Concurrent)
Kyushu University Hospital Hematology, Oncology & Cardiovascular medicine(Concurrent)
School of Medicine Department of Medicine(Concurrent)
Title
Assistant Professor
Profile
Basic and clinical research Clinical service
Homepage

Research Areas

  • Life Science / Hematology and medical oncology

  • Life Science / Tumor diagnostics and therapeutics

  • Life Science / Tumor biology

  • Life Science / Gastroenterology

Degree

  • Ph.D.

Research History

  • Kyushu University Graduate School of Medical Sciences Department of Oncology and Social Medicine Associate Professor 

    2020.10 - 2024.3

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    Country:Japan

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  • Kyushu Univeristy Comprehensive Oncology Assistant Professor 

    2024.4 - Present

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    Country:Japan

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  • 九州大学病院 血液・腫瘍・心血管内科  

    2020.10 - Present

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  • 2012.5-2018.9 米国Stanford大学 研究員   

Education

  • Kyushu University   Graduate School of Medical Sicences   Department of Medicine and Biosystemic Science

    2006.4 - 2012.3

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    Country:Japan

  • Oita Medical University   Faculty of Medicine   医学科

    1997.4 - 2003.3

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    Country:Japan

Research Interests・Research Keywords

  • Research theme: Cancer Stem Cell

    Keyword: Cancer Stem Cell

    Research period: 2024

  • Research theme: Epigenetics

    Keyword: Epigenetics

    Research period: 2024

  • Research theme: Biomarker

    Keyword: Biomarker

    Research period: 2024

  • Research theme: Breast Cancer

    Keyword: Breast Cancer

    Research period: 2024

  • Research theme: Colorectal Cancer

    Keyword: Colorectal Cancer

    Research period: 2024

  • Research theme: Aging

    Keyword: Aging

    Research period: 2024

  • Research theme: Gastric Cancer

    Keyword: Gastric Cancer

    Research period: 2024

  • Research theme: Characterization of immune responses in tumor mecroenvironment of patients with clonal hematopoiesis

    Keyword: Clonal hematopoiesis, Cancer, Microenvironment

    Research period: 2021.4

  • Research theme: Establishment of a new model for human colorectal cancers

    Keyword: Cancer, Chromosome abnormalities

    Research period: 2019.4

Papers

  • Spatial dynamics of CD39+CD8+ exhausted T cell reveal tertiary lymphoid structures-mediated response to PD-1 blockade in esophageal cancer. International journal

    Kenro Tanoue, Hirofumi Ohmura, Koki Uehara, Mamoru Ito, Kyoko Yamaguchi, Kenji Tsuchihashi, Yudai Shinohara, Peng Lu, Shingo Tamura, Hozumi Shimokawa, Taichi Isobe, Hiroshi Ariyama, Yoshihiro Shibata, Risa Tanaka, Hitoshi Kusaba, Taito Esaki, Kenji Mitsugi, Daisuke Kiyozawa, Takeshi Iwasaki, Hidetaka Yamamoto, Yoshinao Oda, Koichi Akashi, Eishi Baba

    Nature communications   15 ( 1 )   9033 - 9033   2024.10   eISSN:2041-1723

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Nature Communications  

    Despite the success of immune checkpoint blockade (ICB) therapy for esophageal squamous cell cancer, the key immune cell populations that affect ICB efficacy remain unclear. Here, imaging mass cytometry of tumor tissues from ICB-treated patients identifies a distinct cell population of CD39+PD-1+CD8+ T cells, specifically the TCF1+ subset, precursor exhausted T (CD39+ Tpex) cells, which positively correlate with ICB benefit. CD39+ Tpex cells are predominantly in the stroma, while differentiated CD39+ exhausted T cells are abundantly and proximally within the parenchyma. Notably, CD39+ Tpex cells are concentrated within and around tertiary lymphoid structure (TLS). Accordingly, tumors harboring TLSs have more of these cells in tumor areas than tumors lacking TLSs, suggesting Tpex cell recruitment from TLSs to tumors. In addition, circulating CD39+ Tpex cells are also increased in responders following ICB therapy. Our findings show that this unique subpopulation of CD39+PD-1+CD8+ T cells is crucial for ICB benefit, and suggest a key role in TLS-mediated immune responses against tumors.

    DOI: 10.1038/s41467-024-53262-w

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  • Impact of Genomic Alterations on Efficacy of Trastuzumab Deruxtecan Against Human Epidermal Growth Factor Receptor-2–Positive Advanced Gastric Cancer International journal

    Kyoko Yamaguchi, Mamoru Ito, Taichi Isobe, Sakuya Koreishi, Ryosuke Taguchi, Koki Uehara, Shohei Ueno, Takashi Imajima, Takafumi Kitazono, Kenji Tsuchihashi, Hirofumi Ohmura, Tomoyasu Yoshihiro, Kenro Tanoue, Satoshi Nishiyori, Eiji Iwama, Takahiro Maeda, Koichi Akashi, Eishi Baba

    JCO Precision Oncology   8 ( 8 )   e2300681   2024.5   eISSN:2473-4284

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:American Society of Clinical Oncology (ASCO)  

    PURPOSE

    The impact of genomic alterations on response and resistance to trastuzumab deruxtecan (T-DXd) has not been elucidated. Thus, we sought to identify factors predicting sensitivity to T-DXd in gastric or gastroesophageal junction (G/GEJ) cancer.

    METHODS

    We conducted a retrospective study using real-world clinical data and next-generation sequencing–based comprehensive genomic profiling (CGP) data from patients with advanced G/GEJ cancers, collected by the nationwide database in Japan. We analyzed the associations between genomic alterations and the patients' survivals after T-DXd treatment.

    RESULTS

    In 114 patients with human epidermal growth factor receptor-2 (HER2)–positive G/GEJ cancer treated with T-DXd, the most frequently altered genes were TP53 (82%), ERBB2 (80%), and CCNE1 (36%). Multivariate Cox regression analysis revealed CCNE1 amplification to be a significant predictor of shorter progression-free survival (PFS) after T-DXd treatment among 91 patients whose CGP samples were obtained before T-DXd (median PFS, 131 days v 189 days; hazard ratio [HR], 1.90 [95% CI, 1.02 to 3.53]; P = .044). Analyses of 1,450 G/GEJ cancers revealed significant CCNE1/ ERBB2 coamplification (41% relative to 11% CCNE1 amplification in ERBB2-nonamplified tumors; P < .0001). ERBB2-activating mutations were also detected in 3.7% of G/GEJ cancers and in 8.8% of HER2-positive G/GEJ cancers treated with T-DXd. Patients with ERBB2-mutated tumors showed shorter PFS than those without ERBB2 mutations after T-DXd treatment (mPFS, 105 v 180 days; P = .046).

    CONCLUSION

    CCNE1 amplification may confer primary resistance to T-DXd in HER2-positive G/GEJ cancer, suggesting that the cell cycle could be a potential therapeutic target in CCNE1/ERBB2 coamplified tumors. ERBB2-activating mutation may also attenuate T-DXd efficacy in HER2-positive G/GEJ cancer.

    DOI: 10.1200/po.23.00681

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  • An organism-wide atlas of hormonal signaling based on the mouse lemur single-cell transcriptome Reviewed

    Shixuan Liu, Camille Ezran, Michael F. Z. Wang, Zhengda Li, Kyle Awayan, Snigdha Agarwal, Aditi Agrawal, Ahmad Al-Moujahed, Alina Alam, Megan A. Albertelli, Paul Allegakoen, Thomas Ambrosi, Jane Antony, Steven Artandi, Fabienne Aujard, Ankit Baghel, Isaac Bakerman, Trygve. E. Bakken, Jalal Baruni, Philip Beachy, Biter Bilen, Olga Botvinnik, Scott. D. Boyd, Deviana Burhan, Kerriann M. Casey, Charles Chan, Charles. A. Chang, Stephen Chang, Ming Chen, Michael F. Clarke, Sheela Crasta, Rebecca Culver, Jessica D’Addabbo, Spyros Darmanis, Roozbeh Dehghannasiri, Song-Lin Ding, Connor V. Duffy, F. Hernán Espinoza, Jean Farup, Hannah K. Frank, Margaret Fuller, Astrid Gillich, Elias Godoy, Dita Gratzinger, Lisbeth A. Guethlein, Yan Hang, Kazuteru Hasegawa, Rebecca D. Hodge, Malachia Hoover, Franklin W. Huang, Kerwyn C. Huang, Shelly Huynh, Taichi Isobe, Carly Israel, SoRi Jang, Qiuyu Jing, Robert C. Jones, Jengmin Kang, Caitlin J. Karanewsky, Jim Karkanias, Justus Kebschull, Aaron Kershner, Lily Kim, Seung K. Kim, E. Christopher Kirk, Winston Koh, Silvana Konermann, William Kong, Corinne Lautier, Song Eun Lee, Ed S. Lein, Rebecca Lewis, Peng Li, Shengda Lin, Yin Liu, Gabriel Loeb, Wan-Jin Lu, Katherine Lucot, Liqun Luo, Ashley Maynard, Aaron McGeever, Ross Metzger, Jingsi Ming, Tom Montine, Antoine de Morree, Maurizio Morri, Karim Mrouj, Shravani Mukherjee, Ahmad Nabhan, Saba Nafees, Norma Neff, Patrick Neuhöfer, Patricia Nguyen, Jennifer Okamoto, Julia Olivieri, Youcef Ouadah, Honor Paine, Peter Parham, Jozeph L. Pendleton, Lolita Penland, Martine Perret, Angela Oliveira Pisco, Zhen Qi, Stephen R. Quake, Ute Radespiel, Thomas A. Rando, Hajanirina Noëline Ravelonjanahary, Andriamahery Razafindrakoto, Julia Salzman, Nicholas Schaum, Robert Schopler, Bronwyn Scott, Liza Shapiro, Hosu Sin, Rahul Sinha, Rene Sit, Geoff Stanley, Lubert Stryer, Varun Ramanan Subramaniam, Aditi Swarup, Michelle Tan, Weilun Tan, Alexander Tarashansky, Aris Taychameekiatchai, Kyle J. Travaglini, Andoni Urtasun, Sivakamasundari, Avin Veerakumar, Venkata N. P. Vemuri, Jean-Michel Verdier, Douglas Vollrath, Bo Wang, Bruce Wang, Gefei Wang, James Webber, Hannah Weinstein, Irving L. Weissman, Amanda L. Wiggenhorn, Cathy V. Williams, Patricia Wright, Albert Y. Wu, Angela Ruohao Wu, Timothy Ting-Hsuan Wu, Tony Wyss-Coray, BaoXiang Li, Jia Yan, Can Yang, Jinxurong Yang, Anne D. Yoder, Brian Yu, Andrea R. Yung, Yue Zhang, Jia Zhao, Zicheng Zhao, Jonathan Z. Long, Iwijn De Vlaminck, Sheng Wang, Jacques Epelbaum, Christin S. Kuo, Jérémy Terrien, Mark A. Krasnow, James E. Ferrell

    Nature Communications   15 ( 1 )   2024.3   eISSN:2041-1723

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    Abstract

    Hormones mediate long-range cell communication and play vital roles in physiology, metabolism, and health. Traditionally, endocrinologists have focused on one hormone or organ system at a time. Yet, hormone signaling by its very nature connects cells of different organs and involves crosstalk of different hormones. Here, we leverage the organism-wide single cell transcriptional atlas of a non-human primate, the mouse lemur (Microcebus murinus), to systematically map source and target cells for 84 classes of hormones. This work uncovers previously-uncharacterized sites of hormone regulation, and shows that the hormonal signaling network is densely connected, decentralized, and rich in feedback loops. Evolutionary comparisons of hormonal genes and their expression patterns show that mouse lemur better models human hormonal signaling than mouse, at both the genomic and transcriptomic levels, and reveal primate-specific rewiring of hormone-producing/target cells. This work complements the scale and resolution of classical endocrine studies and sheds light on primate hormone regulation.

    DOI: 10.1038/s41467-024-46070-9

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    Other Link: https://www.nature.com/articles/s41467-024-46070-9

  • Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets Reviewed International journal

    Jia Zhao, Gefei Wang, Jingsi Ming, Zhixiang Lin, Yang Wang, Snigdha Agarwal, Aditi Agrawal, Ahmad Al-Moujahed, Alina Alam, Megan A. Albertelli, Paul Allegakoen, Thomas Ambrosi, Jane Antony, Steven Artandi, Fabienne Aujard, Kyle Awayan, Ankit Baghel, Isaac Bakerman, Trygve E. Bakken, Jalal Baruni, Philip Beachy, Biter Bilen, Olga Botvinnik, Scott D. Boyd, Deviana Burhan, Kerriann M. Casey, Charles Chan, Charles A. Chang, Stephen Chang, Ming Chen, Michael F. Clarke, Sheela Crasta, Rebecca Culver, Jessica D’Addabbo, Spyros Darmanis, Roozbeh Dehghannasiri, Song-Lin Ding, Connor V. Duffy, Jacques Epelbaum, F. Hernán Espinoza, Camille Ezran, Jean Farup, James E. Ferrell Jr, Hannah K. Frank, Margaret Fuller, Astrid Gillich, Elias Godoy, Dita Gratzinger, Lisbeth A. Guethlein, Yan Hang, Kazuteru Hasegawa, Rebecca D. Hodge, Malachia Hoover, Franklin W. Huang, Kerwyn Casey Huang, Shelly Huynh, Taichi Isobe, Carly Israel, SoRi Jang, Qiuyu Jing, Robert C. Jones, Jengmin Kang, Caitlin J. Karanewsky, Jim Karkanias, Justus Kebschull, Aaron Kershner, Lily Kim, Seung K. Kim, E. Christopher Kirk, Winston Koh, Silvana Konermann, William Kong, Mark A. Krasnow, Christin Kuo, Corinne Lautier, Song Eun Lee, Ed S. Lein, Rebecca Lewis, Peng Li, Shengda Lin, Shixuan Liu, Yin Liu, Gabriel Loeb, Jonathan Z. Long, Wan-Jin Lu, Katherine Lucot, Liqun Luo, Aaron McGeever, Ross Metzger, Jingsi Ming, Tom Montine, Antoine de Morree, Maurizio Morri, Karim Mrouj, Shravani Mukherjee, Ahmad Nabhan, Saba Nafees, Norma Neff, Patrick Neuhöfer, Patricia Nguyen, Jennifer Okamoto, Julia Olivieri, Youcef Ouadah, Honor Paine, Peter Parham, Jozeph L. Pendleton, Lolita Penland, Martine Perret, Angela Oliveira Pisco, Zhen Qi, Stephen R. Quake, Ute Radespiel, Thomas A. Rando, Hajanirina Noëline Ravelonjanahary, Andriamahery Razafindrakoto, Julia Salzman, Nicholas Schaum, Robert Schopler, Bronwyn Scott, Liza Shapiro, Hosu Sin, Rahul Sinha, Rene Sit, Geoff Stanley, Lubert Stryer, Varun Ramanan Subramaniam, Aditi Swarup, Weilun Tan, Alexander Tarashansky, Aris Taychameekiatchai, Jérémy Terrien, Kyle J. Travaglini, Andoni Urtasun, Sivakamasundari, Avin Veerakumar, Venkata Naga Pranathi Vemuri, Jean-Michel Verdier, Iwijn De Vlaminck, Douglas Vollrath, Bo Wang, Bruce Wang, Gefei Wang, Michael F. Z. Wang, Sheng Wang, James Webber, Hannah Weinstein, Irving L. Weissman, Amanda L. Wiggenhorn, Cathy V. Williams, Patricia Wright, Albert Y. Wu, Angela Ruohao Wu, Tony Wyss-Coray, Bao Xiang, Jia Yan, Can Yang, Jinxurong Yang, Anne D. Yoder, Brian Yu, Andrea R. Yung, Yue Zhang, Jia Zhao, Zicheng Zhao, Angela Ruohao Wu, Can Yang

    Nature Computational Science   2 ( 5 )   317 - 330   2022.5   eISSN:2662-8457

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    The rapid emergence of large-scale atlas-level single-cell RNA-seq datasets presents remarkable opportunities for broad and deep biological investigations through integrative analyses. However, harmonizing such datasets requires integration approaches to be not only computationally scalable, but also capable of preserving a wide range of fine-grained cell populations. We have created Portal, a unified framework of adversarial domain translation to learn harmonized representations of datasets. When compared to other state-of-the-art methods, Portal achieves better performance for preserving biological variation during integration, while achieving the integration of millions of cells, in minutes, with low memory consumption. We show that Portal is widely applicable to integrating datasets across different samples, platforms and data types. We also apply Portal to the integration of cross-species datasets with limited shared information among them, elucidating biological insights into the similarities and divergences in the spermatogenesis process among mouse, macaque and human.

    DOI: 10.1038/s43588-022-00251-y

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  • Molecular hallmarks of heterochronic parabiosis at single-cell resolution Reviewed International journal

    Róbert Pálovics, Andreas Keller, Nicholas Schaum, Weilun Tan, Tobias Fehlmann, Michael Borja, Fabian Kern, Liana Bonanno, Kruti Calcuttawala, James Webber, Aaron McGeever, Nicole Almanzar, Jane Antony, Ankit S. Baghel, Isaac Bakerman, Ishita Bansal, Ben A. Barres, Philip A. Beachy, Daniela Berdnik, Biter Bilen, Douglas Brownfield, Corey Cain, Charles K. F. Chan, Michelle B. Chen, Michael F. Clarke, Stephanie D. Conley, Aaron Demers, Kubilay Demir, Antoine de Morree, Tessa Divita, Haley du Bois, Hamid Ebadi, F. Hernán Espinoza, Matt Fish, Qiang Gan, Benson M. George, Astrid Gillich, Rafael Gòmez-Sjöberg, Foad Green, Geraldine Genetiano, Xueying Gu, Gunsagar S. Gulati, Oliver Hahn, Michael Seamus Haney, Yan Hang, Lincoln Harris, Mu He, Shayan Hosseinzadeh, Albin Huang, Kerwyn Casey Huang, Tal Iram, Taichi Isobe, Feather Ives, Robert C. Jones, Kevin S. Kao, Guruswamy Karnam, Aaron M. Kershner, Nathalie Khoury, Seung K. Kim, Bernhard M. Kiss, William Kong, Mark A. Krasnow, Maya E. Kumar, Christin S. Kuo, Jonathan Lam, Davis P. Lee, Song E. Lee, Benoit Lehallier, Olivia Leventhal, Guang Li, Qingyun Li, Ling Liu, Annie Lo, Wan-Jin Lu, Maria F. Lugo-Fagundo, Anoop Manjunath, Andrew P. May, Ashley Maynard, Marina McKay, M. Windy McNerney, Bryan Merrill, Ross J. Metzger, Marco Mignardi, Dullei Min, Ahmad N. Nabhan, Katharine M. Ng, Patricia K. Nguyen, Joseph Noh, Roel Nusse, Rasika Patkar, Weng Chuan Peng, Lolita Penland, Katherine Pollard, Robert Puccinelli, Zhen Qi, Thomas A. Rando, Eric J. Rulifson, Joe M. Segal, Shaheen S. Sikandar, Rahul Sinha, Rene V. Sit, Justin Sonnenburg, Daniel Staehli, Krzysztof Szade, Michelle Tan, Cristina Tato, Krissie Tellez, Laughing Bear Torrez Dulgeroff, Kyle J. Travaglini, Carolina Tropini, Margaret Tsui, Lucas Waldburger, Bruce M. Wang, Linda J. van Weele, Kenneth Weinberg, Irving L. Weissman, Michael N. Wosczyna, Sean M. Wu, Jinyi Xiang, Soso Xue, Kevin A. Yamauchi, Andrew C. Yang, Lakshmi P. Yerra, Justin Youngyunpipatkul, Brian Yu, Fabio Zanini, Macy E. Zardeneta, Alexander Zee, Chunyu Zhao, Fan Zhang, Hui Zhang, Martin Jinye Zhang, Lu Zhou, James Zou, Jian Luo, Angela Oliveira Pisco, Jim Karkanias, Norma F. Neff, Spyros Darmanis, Stephen R. Quake, Tony Wyss-Coray

    Nature   603 ( 7900 )   309 - 314   2022.3   ISSN:0028-0836 eISSN:1476-4687

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    The ability to slow or reverse biological ageing would have major implications for mitigating disease risk and maintaining vitality1. Although an increasing number of interventions show promise for rejuvenation2, their effectiveness on disparate cell types across the body and the molecular pathways susceptible to rejuvenation remain largely unexplored. Here we performed single-cell RNA sequencing on 20 organs to reveal cell-type-specific responses to young and aged blood in heterochronic parabiosis. Adipose mesenchymal stromal cells, haematopoietic stem cells and hepatocytes are among those cell types that are especially responsive. On the pathway level, young blood invokes new gene sets in addition to reversing established ageing patterns, with the global rescue of genes encoding electron transport chain subunits pinpointing a prominent role of mitochondrial function in parabiosis-mediated rejuvenation. We observed an almost universal loss of gene expression with age that is largely mimicked by parabiosis: aged blood reduces global gene expression, and young blood restores it in select cell types. Together, these data lay the groundwork for a systemic understanding of the interplay between blood-borne factors and cellular integrity.

    DOI: 10.1038/s41586-022-04461-2

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  • Ageing hallmarks exhibit organ-specific temporal signatures Reviewed

    Nicholas Schaum, Benoit Lehallier, Oliver Hahn, Róbert Pálovics, Shayan Hosseinzadeh, Song E. Lee, Rene Sit, Davis P. Lee, Patricia Morán Losada, Macy E. Zardeneta, Tobias Fehlmann, James T. Webber, Aaron McGeever, Kruti Calcuttawala, Hui Zhang, Daniela Berdnik, Vidhu Mathur, Weilun Tan, Alexander Zee, Michelle Tan, Tabula Muris Consortium, Angela Oliveira Pisco, Jim Karkanias, Norma F. Neff, Andreas Keller, Spyros Darmanis, Stephen R. Quake, Tony Wyss-Coray

    Nature   583 ( 7817 )   596 - 602   2020.7

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    DOI: 10.1038/s41586-020-2499-y

  • A single-cell transcriptomic atlas characterizes ageing tissues in the mouse Reviewed

    Tabula Muris Consortium

    Nature   583 ( 7817 )   590 - 595   2020.7

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    DOI: 10.1038/s41586-020-2496-1

  • miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells. Reviewed International journal

    Junko Mukohyama, Taichi Isobe, Qingjiang Hu, Takanori Hayashi, Takashi Watanabe, Masao Maeda, Hisano Yanagi, Xin Qian, Kimihiro Yamashita, Hironobu Minami, Koshi Mimori, Debashis Sahoo, Yoshihiro Kakeji, Akira Suzuki, Piero Dalerba, Yohei Shimono

    Cancer research   79 ( 20 )   5151 - 5158   2019.10

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    DOI: 10.1158/0008-5472.CAN-18-3544

  • Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. Reviewed

    Tabula Muris Consortium

    Nature   562   367 - 372   2018.10

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    Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris.

    DOI: 10.1038/s41586-018-0590-4

  • E‑cadherin regulates proliferation of colorectal cancer stem cells through NANOG. Reviewed International journal

    Tamura S, Isobe T, Ariyama H, Nakano M, Kikushige Y, Takaishi S, Kusaba H, Takenaka K, Ueki T, Nakamura M, Akashi K, Baba E

    Oncology reports   40 ( 2 )   693 - 703   2018.8

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    DOI: 10.3892/or.2018.6464

  • miR-142 regulates the tumorigenicity of human breast cancer stem cells through the canonical WNT signaling pathway Reviewed

    Taichi Isobe, Shigeo Hisamori, Daniel J. Hogan, Maider Zabala, David G. Hendrickson, Piero Dalerba, Shang Cai, Ferenc Scheeren, Angera H. Kuo, Shaheen S. Sikandar, Jessica S. Lam, Dalong Qian, Frederick M. Dirbas, George Somlo, Kaiqin Lao, Patrick O. Brown, Michael F. Clarke, Yohei Shimono

    ELIFE   3   2014.11

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    DOI: 10.7554/eLife.01977

  • Analysis of Adverse Events of Bevacizumab-containing Systemic Chemotherapy for Metastatic Colorectal Cancer in Japan Reviewed

    Taichi Isobe, Keita Uchino, Chinatsu Makiyama, Hiroshi Ariyama, Shuji Arita, Shingo Tamura, Masato Komoda, Hitoshi Kusaba, Tsuyoshi Shirakawa, Taito Esaki, Kenji Mitsugi, Shigeo Takaishi, Koichi Akashi, Eishi Baba

    ANTICANCER RESEARCH   34 ( 4 )   2035 - 2040   2014.4

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  • Human STEAP3 maintains tumor growth under hypoferric condition Reviewed

    Taichi Isobe, Eishi Baba, Shuji Arita, Masato Komoda, Shingo Tamura, Tsuyoshi Shirakawa, Hiroshi Ariyama, Shigeo Takaishi, Hitoshi Kusaba, Takashi Ueki, Koichi Akashi

    EXPERIMENTAL CELL RESEARCH   317 ( 18 )   2582 - 2591   2011.11

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    DOI: 10.1016/j.yexcr.2011.07.022

  • Effective monotherapy with amrubicin for a refractory extrapulmonary small-cell carcinoma of the liver. Reviewed

    Isobe T, Yanai S, Kusaba H, Yada S, Kuroda Y, Tamiya S, Matsumoto T, Baba E, Harada M

    Case reports in medicine   2009   538081   2009.6

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    Effective monotherapy with amrubicin for a refractory extrapulmonary small-cell carcinoma of the liver.

    DOI: 10.1155/2009/538081

  • Autoimmune thrombocytopenia with clonal expansion of CD8-positive T cells after autologous peripheral blood stem cell transplantation for diffuse large B-cell lymphoma Reviewed

    T Isobe, TE Tanimoto, G Nakaji, T Miyamoto, S Yamasaki, K Takase, A Numata, T Fukuda, K Nagafuji, S Inaba, M Harada

    BONE MARROW TRANSPLANTATION   35 ( 3 )   315 - 316   2005.2

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    DOI: 10.1038/sj.bmt.1704750

  • Elucidation of the mechanism of carcinogenic transformation of human gastric epithelial cells in atrophic gastritis. International journal

    Tomoyasu Yoshihiro, Kyoko Yamaguchi, Hiroshi Ariyama, Sakuya Koreishi, Koki Uehara, Hirofumi Ohmura, Mamoru Ito, Kenji Tsuchihashi, Taichi Isobe, Koji Shindo, Kenoki Ohuchida, Masafumi Nakamura, Yoshihiro Nagao, Yoshinao Oda, Koichi Akashi, Eishi Baba

    Biochimica et biophysica acta. Molecular basis of disease   1871 ( 6 )   167843 - 167843   2025.8   ISSN:0925-4439 eISSN:1879-260X

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Biochimica Et Biophysica Acta Molecular Basis of Disease  

    BACKGROUND: Helicobacter pylori infection and subsequent atrophic gastritis (AG) and intestinal metaplasia (IM) are regarded as precursor conditions for gastric cancer (GC). Though diverse mechanisms of carcinogenesis from AG and IM have been clarified using mouse models, few studies using human models have been reported. Here, we describe in vitro modeling of IM, as well as in vivo modeling of the oncogenic transformation from AG using human gastric organoids. METHODS: Organoids derived from patients with AG were established and characterized by immunohistochemistry and in situ hybridization. Niche factor withdrawal and genetic engineering using CRISPR/Cas9 were conducted for modeling IM, and manipulated organoids were xenografted subcutaneously in mice to establish a GC model. RESULTS: AG organoids (AGOs) were maintained by Wnt niche factors; withdrawal of these factors led to differentiation toward foveolar cells. Knockout of Runt-related transcription factor 3 (RUNX3), or activation of bone morphogenetic protein (BMP) signaling, resulted in accumulation of the key IM markers caudal-type homeobox 2 (CDX2) and mucin 2 (MUC2) in AGOs; disruption of SMAD4 counteracted the induction of these markers. Organoids doubly deficient for TP53 and SMAD4 formed larger and more proliferative p21 -negative subcutaneous tumors than did RUNX3-deficient organoids, suggesting that induction of a senescent state is a key barrier in stepwise carcinogenesis from AG. CONCLUSIONS: Wnt signaling is essential for homeostasis of AG, and SMAD4-dependent activation of BMP signaling promotes intestinal differentiation. Combined disruption of TP53 and SMAD4 confers tumorigenic potential to AGOs by inhibiting p21 induction.

    DOI: 10.1016/j.bbadis.2025.167843

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  • Lymphoproliferative Disorder in an Esophageal Cancer Patient Treated with Pembrolizumab

    Matsumura Takashi, Tsuchihashi Kenji, Yamamoto Takeo, Jinnouchi Fumiaki, Kusano Wataru, Kusumoto Yota, Arimizu Kohei, Ohmura Hirofumi, Kuma Yuki, Moriyama Shohei, Yamaguchi Kyoko, Ito Mamoru, Isobe Taichi, Ariyama Hiroshi, Oda Yoshinao, Akashi Koichi, Baba Eishi

    Internal Medicine   64 ( 11 )   1728 - 1732   2025.6   ISSN:09182918 eISSN:13497235

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    <p>A 75-year-old man diagnosed with esophageal cancer and lung metastasis received a combination of fluorouracil, cisplatin, and pembrolizumab. During pembrolizumab maintenance therapy, lymphoproliferative lesions at the lips and mouth and multiple lymph node swellings appeared. Histologically, Epstein-Barr virus (EBV)-encoded RNA was positive, and EBV-DNA was detected in the blood. The patient was diagnosed with other iatrogenic immunodeficiency-associated lymph proliferative disorders (OIIA-LPDs) related to EBV activation induced by pembrolizumab. Rituximab was administered, resulting in the improvement of the OIIA-LPD. The emergence of an OIIA-LPD merits close attention in patients receiving immune checkpoint inhibitors. </p>

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  • Metastatic urachal carcinoma treated with trifluridine/tipiracil and bevacizumab: a case report

    Kitazono, T; Isobe, T; Nishiyori, S; Kusano, W; Tanoue, K; Yoshihiro, T; Ohmura, H; Yamaguchi, K; Ito, M; Tsuchihashi, K; Akashi, K; Baba, E

    INTERNATIONAL CANCER CONFERENCE JOURNAL   2025.5   ISSN:2192-3183

  • Treatment of malignant primary cardiac tumors requires attention to cardiovascular complications: a single-center, retrospective study

    Furukawa Kanami, Ohmura Hirofumi, Moriyama Shohei, Uehara Koki, Ito Mamoru, Tsuchihashi Kenji, Isobe Taichi, Ariyama Hiroshi, Fukata Mitsuhiro, Kusaba Hitoshi, Shiose Akira, Akashi Koichi, Baba Eishi

    Japanese Journal of Clinical Oncology   55 ( 2 )   113 - 122   2025.2   ISSN:0368-2811

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  • The E2F4 transcriptional repressor is a key mechanistic regulator of colon cancer resistance to irinotecan (CPT-11).

    Matsubara J, Li YF, Koul S, Mukohyama J, Salazar LEV, Isobe T, Qian D, Clarke MF, Sahoo D, Altman RB, Dalerba P

    bioRxiv : the preprint server for biology   2025.1

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    DOI: 10.1101/2025.01.22.633435

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  • Efficacy of pembrolizumab in microsatellite-stable, tumor mutational burden-high metastatic colorectal cancer: genomic signatures and clinical outcomes

    Yamaguchi, K; Tsuchihashi, K; Ueno, S; Uehara, K; Taguchi, R; Ito, M; Isobe, T; Imajima, T; Kitazono, T; Tanoue, K; Ohmura, H; Akashi, K; Baba, E

    ESMO OPEN   10 ( 1 )   104108   2025.1   eISSN:2059-7029

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    Background: Pembrolizumab, an immune checkpoint inhibitor (ICI), shows significant survival benefits in patients with microsatellite instability-high (MSI-H) metastatic colorectal cancer (mCRC), but its efficacy in microsatellite-stable (MSS) mCRC is limited. Although ICIs are effective in tumor mutational burden-high (TMB-H) solid tumors, the impact on MSS-TMB-H mCRC, a rare subset within MSS mCRC, remains unclear. Materials and methods: We conducted a retrospective analysis using clinical and genomic data from the Center for Cancer Genomics and Advanced Therapeutics (C-CAT) repository in Japan. Patients with MSS-TMB-H mCRC who underwent tissue-based comprehensive genomic profiling and were treated with pembrolizumab or other later-line therapies were included. Pembrolizumab's efficacy was compared with that of trifluridine/tipiracil (FTD/TPI) and regorafenib. Genomic profiles of MSS-TMB-H, MSI-H-TMB-H, and MSS-TMB-low (TMB-L) CRCs were analyzed across 71 cancer-related genes. Results: Among 127 TMB-H mCRC cases treated with pembrolizumab in the C-CAT repository, 77 were MSS and 50 were MSI-H. Pembrolizumab showed significantly shorter time to treatment failure (TTF) and overall survival (OS) in patients with MSS-TMB-H mCRC compared with those with MSI-H-TMB-H mCRC [median TTF 2.0 versus 10.6 months; hazard ratio (HR) 4.79, 95% confidence interval (CI) 2.65-8.64, median OS 4.5 versus 33.6 months; HR 9.86, 95% CI 3.93-24.77, both P < 0.0001]. Among MSS-TMB-H mCRC patients, 19 received pembrolizumab, 73 received FTD/TPI (±bevacizumab), and 18 received regorafenib as their first later-line therapy. Pembrolizumab showed significantly shorter TTF and OS compared with FTD/TPI (median TTF 1.6 versus 4.1 months; HR 2.66, 95% CI 1.41-5.02, P = 0.0017, median OS 5.4 versus 13.8 months; HR 2.42, 95% CI, 1.09-5.38, P = 0.025). Genomic analysis of 6737 CRCs revealed that MSS-TMB-H CRCs harbored fewer pathogenic alterations than MSI-H-TMB-H CRCs but had a profile similar to MSS-TMB-L CRCs. Conclusions: Pembrolizumab may be less effective than FTD/TPI in later-line treatment of MSS-TMB-H mCRC, potentially due to genomic similarities between MSS-TMB-H and MSS-TMB-L CRC, suggesting the need for alternative therapeutic strategies in this subgroup.

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  • Treatment of malignant primary cardiac tumors requires attention to cardiovascular complications: a single-center, retrospective study. International journal

    Kanami Furukawa, Hirofumi Ohmura, Shohei Moriyama, Koki Uehara, Mamoru Ito, Kenji Tsuchihashi, Taichi Isobe, Hiroshi Ariyama, Mitsuhiro Fukata, Hitoshi Kusaba, Akira Shiose, Koichi Akashi, Eishi Baba

    Japanese journal of clinical oncology   55 ( 2 )   113 - 122   2024.10   ISSN:0368-2811 eISSN:1465-3621

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    BACKGROUND: Malignant primary cardiac tumors require multimodal approaches including surgery, chemotherapy and radiotherapy, but these treatments can be associated with cardiovascular complications. However, few reports have described the cardiovascular complications related to primary cardiac tumor treatment because of their rarity. METHODS: Clinical records of patients with primary cardiac tumors treated at Kyushu University Hospital from January 2010 to August 2021 were retrospectively examined. RESULTS: Of the 47 primary cardiac tumor patients, 13 (28%) were diagnosed with malignancy, including 5 angiosarcomas, 3 intimal sarcomas, 3 diffuse large B-cell lymphomas, 1 Ewing's sarcoma and 1 fibrosarcoma. Cardiovascular events were observed in 10 patients (77%), including cardiac dysfunction in 6 patients, arrhythmias in 5 patients, right heart failure in 2 patients, and excessively prolonged prothrombin time due to the combination of warfarin and chemotherapy in 1 patient. Two patients who showed notable cardiac complications are described. Case A involved a 69-year-old woman who underwent surgery for a left atrial intimal sarcoma, followed by postoperative chemotherapy with doxorubicin plus ifosfamide and radiotherapy. After three cycles of chemotherapy and sequential radiotherapy, her left ventricular ejection fraction decreased to 34%, and ongoing heart failure therapy was required. Case B involved a 66-year-old man who received chemotherapy for primary cardiac lymphoma, resulting in tumor shrinkage. However, due to tumor involvement of the intraventricular septum, atrioventricular block developed, requiring cardiac pacemaker implantation. CONCLUSION: High incidences of cardiac failure and arrhythmias were observed during multimodal treatments for malignant primary cardiac tumors. Proper management of complications may lead to a favorable prognosis in patients with malignant primary cardiac tumors.

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  • Survival outcomes including salvage therapy of adult head and neck para-meningeal rhabdomyosarcoma: a multicenter retrospective study from Japan Reviewed International journal

    Kenji Tsuchihashi, Mamoru Ito, Shuji Arita, Hitoshi Kusaba, Wataru Kusano, Takashi Matsumura, Takafumi Kitazono, Shohei Ueno, Ryosuke Taguchi, Tomoyasu Yoshihiro, Yasuhiro Doi, Kohei Arimizu, Hirofumi Ohmura, Tatsuhiro Kajitani, Kenta Nio, Michitaka Nakano, Kotoe Oshima, Shingo Tamura, Tsuyoshi Shirakawa, Hozumi Shimokawa, Keita Uchino, Fumiyasu Hanamura, Yuta Okumura, Masato Komoda, Taichi Isobe, Hiroshi Ariyama, Taito Esaki, Kazuki Hashimoto, Noritaka Komune, Mioko Matsuo, Keiji Matsumoto, Kaori Asai, Tadamasa Yoshitake, Hidetaka Yamamoto, Yoshinao Oda, Koichi Akashi, Eishi Baba

    BMC Cancer   23 ( 1 )   1046 - 1046   2023.10   eISSN:1471-2407

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    Abstract

    Background

    Rhabdomyosarcoma is the most common soft tissue sarcoma in children, but rare in adults. Para-meningeal rhabdomyosarcoma in head and neck (PM-HNRMS) is less applicable for surgery due to the anatomic reason. PM-HNRMS has a poor prognosis in children. However, its clinical outcomes remain unclear in adults due to the rarity. Further, there is almost no detailed data about salvage therapy.

    Methods

    We retrospectively examined the adult patients with PM-HNRMS treated at institutions belonging to the Kyushu Medical Oncology Group from 2009 to 2022. We evaluated the overall survival (OS) and progression-free survival (PFS) of the patients who received a first-line therapy. We also reviewed the clinical outcomes of patients who progressed against a first-line therapy and received salvage therapy.

    Results

    Total 11 patients of PM-HNRMS received a first-line therapy. The characteristics were as follows: median age: 38 years (range 25 – 63 years), histology (alveolar/spindle): 10/1, and risk group (intermediate/high): 7/4. As a first-line therapy, VAC and ARST0431-based regimen was performed in 10 and 1 patients, respectively. During a first-line therapy, definitive radiation for all lesions were performed in seven patients. The median PFS was 14.2 months (95%CI: 6.0 – 25.8 months): 17.1 months (95%CI: 6.0 – not reached (NR)) for patients with stage I-III and 8.5 months (95%CI: 5.2 – 25.8 months) for patients with stage IV. The 1-year and 3-year PFS rates were 54.5% and 11.3% for all patients. Median OS in all patients was 40.8 months (95%CI: 12.1 months–NR): 40.8 months (95%CI: 12.1 – NR) for patients with stage I-III and NR for patients with stage IV. The 5-year OS rate was 48.5% for all patients. Among seven patients who received salvage therapy, three are still alive, two of whom remain disease-free for over 4 years after completion of the last therapy. Those two patients received multi-modal therapy including local therapy for all detected lesions.

    Conclusion

    The cure rate of adult PM-HNRMS is low in spite of a first-line therapy in this study. Salvage therapy might prolong the survival in patients who received the multi-modal therapy including local therapy for all detected lesions.

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    Other Link: https://link.springer.com/article/10.1186/s12885-023-11528-4/fulltext.html

  • Preferential B cell differentiation by combined immune checkpoint blockade for renal cell carcinoma is associated with clinical response and autoimmune reactions. Reviewed International journal

    Koki Uehara, Kenro Tanoue, Kyoko Yamaguchi, Hirofumi Ohmura, Mamoru Ito, Yuzo Matsushita, Kenji Tsuchihashi, Shingo Tamura, Hozumi Shimokawa, Taichi Isobe, Yoshihiro Shibata, Hiroshi Ariyama, Risa Tanaka, Hitoshi Kusaba, Hidetaka Yamamoto, Yoshinao Oda, Koichi Akashi, Eishi Baba

    Cancer immunology, immunotherapy : CII   72 ( 11 )   3543 - 3558   2023.8   ISSN:0340-7004 eISSN:1432-0851

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    Combined immune checkpoint blockade (ICB) is effective therapy for renal cell carcinoma (RCC). However, the dynamic changes in circulating B cells induced by combined ICB have not been clarified. The present study prospectively examined 22 patients scheduled to receive ICB for unresectable or metastatic RCC between March 2018 and August 2021. Eleven patients received combined therapy with anti-PD-1 (nivolumab) and anti-CTLA-4 (ipilimumab), and the other 11 patients received nivolumab monotherapy. Comprehensive phenotypes of circulating immune cells obtained prior to and after ICB therapy were analyzed by flow cytometry. Although the proportion of naïve B cells among total B cells was significantly decreased, that of switched memory B cells was significantly increased after combined therapy. In responders, the proportion of B cells among peripheral blood mononuclear cells was significantly higher prior to ICB therapy, and the proportion of switched memory B cells among total B cells tended to increase after ICB therapy. Of note, the proportion of plasmablasts among total B cells was significantly increased after ICB therapy in patients who developed severe immune-related adverse events (irAEs), and the proportion of B cells among peripheral blood decreased significantly. Furthermore, in four of five patients who developed immune-related hypophysitis following combined therapy, anti-pituitary antibody was detected in the serum. These results suggested that immune-related hypophysitis was closely related to the increase in circulating plasmablasts. Collectively, this study suggests that combined ICB promotes the differentiation of B cell populations, which is associated with efficient tumor suppression and development of irAEs.

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  • RHAMM marks proliferative subpopulation of human colorectal cancer stem cells.

    Nakano Michitaka, Taguchi Ryosuke, Kikushige Yoshikane, Isobe Taichi, Miyawaki Kohta, Mizuno Shinichi, Tsuruta Nobuhiro, Hanamura Fumiyasu, Yamaguchi Kyoko, Yamauchi Takuji, Ariyama Hiroshi, Kusaba Hitoshi, Nakamura Masafumi, Maeda Takahiro, Kuo Calvin J., Baba Eishi, Akashi Koichi

    Cancer Science   114 ( 7 )   2895 - 2906   2023.7   ISSN:1347-9032

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    大腸癌幹細胞の中で増殖状態にあるものの特徴を決定するため、オルガノイドと大腸癌組織を材料に、それらのトランスクリプトミクスを解析した。その結果、CD44陽性を示す通常のヒト大腸癌幹細胞の分画の中に、ヒアルロン酸媒介運動性受容体(RHAMM)を発現している亜集団があることを発見した。細胞種の多様性を再構成することで腫瘍組織のミニチュア版としたオルガノイドを材料に、単一細胞トランスクリプトミクス解析を施行したところ、増殖性を示し、様々な細胞種の中にあって独特の特徴を示すRHAMM陽性細胞があることに注目された。ヒト大腸癌組織からRHAMM陽性CD44陽性の細胞を予期的に分離した結果、分離された同細胞は他の癌細胞と比較して高い増殖特性と自己新生能を現した。RHAMMを阻害するとin vitroでのオルガノイド形成は強く抑制され、in vivoでは腫瘍成長が阻害された。RHAMMは、通常の癌幹細胞分画内に含まれる増殖性の亜集団への特異的マーカーになりうると考えられた。

  • Inhibition of insulin-like growth factor-1 receptor enhances eribulin-induced DNA damage in colorectal cancer.

    Yoshihiro Tomoyasu, Ariyama Hiroshi, Yamaguchi Kyoko, Imajima Takashi, Yamaga Satoru, Tsuchihashi Kenji, Isobe Taichi, Kusaba Hitoshi, Akashi Koichi, Baba Eishi

    Cancer Science   113 ( 12 )   4207 - 4218   2022.12   ISSN:1347-9032

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    クロイソカイメンから発見されたハリコンドリンBの誘導体である微小管標的薬エリブリン(Eri)に対する耐性のメカニズムについて検討した。Eri耐性大腸癌由来SW480細胞におけるインスリン様成長因子-1受容体(IGF-1R)/インスリン受容体(INSR)活性化に対するEri処理の影響を分析した。その結果、Eriへの曝露により、リン酸化されたIGF-1R/INSRとその下流エフェクターにおけるAktの蓄積量が増加し、IGFシグナルが活性化された。Eri処理はIGF-1Rの活性化とそれに続く核移行を誘導したが、IGF-1Rの活性化や核移行を阻害した場合、EriはDNA損傷を誘導し、G2/M停止を促進した。さらに、Eri耐性細胞株であるSW480を用いた異種移植マウスモデルにおいて、EriとIGF-1R阻害剤であるリンシチニブの併用は、いずれの単剤よりも腫瘍増殖を抑制した。以上より、EriとIGF-1R阻害剤の併用はEri耐性を克服することが示唆された。

  • IMPROVE bleeding score predicts major bleeding in advanced gastrointestinal cancer patients with venous thromboembolism. Reviewed International journal

    Hitoshi Kusaba, Shohei Moriyama, Michinari Hieda, Mamoru Ito, Hirofumi Ohmura, Taichi Isobe, Kenji Tsuchihashi, Mitsuhiro Fukata, Hiroshi Ariyama, Eishi Baba

    Japanese journal of clinical oncology   52 ( 10 )   1183 - 1190   2022.10   ISSN:0368-2811 eISSN:1465-3621

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    BACKGROUND: The incidence of venous thromboembolism has been reported as 20% in cancer patients. Anticoagulation therapy is the standard treatment for venous thromboembolism. On the other hand, bleeding should be carefully managed, because advanced cancer, particularly gastrointestinal cancer, carries a high risk of bleeding. However, the optimal management for cancer-associated thromboembolism remains to be clarified. METHODS: We retrospectively examined patients with advanced gastrointestinal cancer, including gastric cancer and colorectal cancer, who were treated with chemotherapy between 2014 and 2018 for the incidence and characteristics of venous thromboembolism and bleeding. RESULTS: In total, 194 patients (120 men, 74 women) were enrolled in this study. The underlying pathology was gastric cancer in 74 cases and colorectal cancer in 120 cases. Of the 194 patients, 40 patients (20.6%) were diagnosed with venous thromboembolism and 10 patients (5.2%) were diagnosed with concomitant pulmonary thromboembolism. Conversely, bleeding was observed in 29 patients (15%). The location of bleeding was the primary tumor in 17 cases, metastatic tumor in 9 and hemorrhagic gastric ulcer in 3. Within the venous thromboembolism group (n = 40), bleeding was observed in 10 patients (25%). Multivariate analysis showed that International Medical Prevention Registry on Venous Thromboembolism (IMPROVE) bleeding score ≥7 correlated significantly with major bleeding (P = 0.01). In patients with a low risk of bleeding, major bleeding was observed in only three patients. CONCLUSIONS: IMPROVE bleeding score may predict the risk for bleeding in gastrointestinal cancer patients with venous thromboembolism. Selecting patients with a low risk of bleeding using with IMPROVE bleeding score is expected to contribute to the safer management of anticoagulation therapy for cancer-associated thromboembolism.

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  • Potential therapeutic targets discovery by transcriptome analysis of an in vitro human gastric signet ring carcinoma model.

    Yamaguchi Kyoko, Yoshihiro Tomoyasu, Ariyama Hiroshi, Ito Mamoru, Nakano Michitaka, Semba Yuichiro, Nogami Jumpei, Tsuchihashi Kenji, Yamauchi Takuji, Ueno Shohei, Isobe Taichi, Shindo Koji, Moriyama Taiki, Ohuchida Kenoki, Nakamura Masafumi, Nagao Yoshihiro, Ikeda Tetsuo, Hashizume Makoto, Konomi Hiroyuki, Torisu Takehiro, Kitazono Takanari, Kanayama Tomohiro, Tomita Hiroyuki, Oda Yoshinao, Kusaba Hitoshi, Maeda Takahiro, Akashi Koichi, Baba Eishi

    Gastric Cancer   25 ( 5 )   862 - 878   2022.9   ISSN:1436-3291

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    E-カドヘリン欠損胃印環細胞癌(SRCC)における新規治療標的を同定することを目的とした。E-カドヘリンをコードするCDH1遺伝子をノックアウト(KO)したヒト胃オルガノイド(hGO)を用いて、in vitroのE-カドヘリン欠損胃癌モデルを作製し、新規治療標的を探索した。CDH1 KO hGO細胞は、SRCCに類似した特徴的な形態変化と高い細胞運動性を示した。RNA配列解析の結果、CDH1 KO hGO細胞では、野生型と比較して、マトリックスメタロプロテアーゼ(MMP)遺伝子の発現が増加していた。MMP阻害剤は、in vitroでCDH1 KO hGO細胞およびSRCC細胞株の細胞運動を抑制した。95例の臨床胃癌組織を用いた免疫蛍光分析により、MMP-3はE-カドヘリン異常のSRCCに特異的に多く存在することが示された。また、CDH1 KO後、CXCR4分子が細胞膜上に移行した。CXCR4のリガンドであるCXCL12を培養液に添加すると、CDH1 KO hGO細胞の細胞生存率が延長し、CXCR4アンタゴニストであるAMD3100によってその効果が消失した。SRCCの臨床サンプルでは、CXCL12を分泌する線維芽細胞が癌領域に著しく浸潤していることを確認した。以上より、MMPとCXCL12/CXCR4軸は、E-カドヘリン欠損SRCCの新規治療標的として有望な候補であると考えられた。

  • Upregulation of BMI1-suppressor miRNAs(miR-200c, miR-203) during terminal differentiation of colon epithelial cells.

    Hisamori Shigeo, Mukohyama Junko, Koul Sanjay, Hayashi Takanori, Rothenberg Michael Evan, Maeda Masao, Isobe Taichi, Valencia Salazar Luis Enrique, Qian Xin, Johnston Darius Michael, Qian Dalong, Lao Kaiqin, Asai Naoya, Kakeji Yoshihiro, Gennarino Vincenzo Alessandro, Sahoo Debashis, Dalerba Piero, Shimono Yohei

    Journal of Gastroenterology   57 ( 6 )   407 - 422   2022.6   ISSN:0944-1174

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    結腸癌組織8例(ヒト6例、マウス2例)から陰窩底部および陰窩頂部の上皮細胞を精製し、335個のmiRNA発現の差異を調べた。最終分化した頂部の上皮細胞で6個のmiRNA(miR-200a、miR-200b、miR-200c、miR-203、miR-210、miR-345)が最も上方制御されていた。ヒト大腸癌におけるこれらのmiRNA発現レベルは相互に正相関していた。相互の相関係数が高いmiRNA(miR-200a、miR-200b、miR-200c)の高発現は生存予後良好と関連した。最も上方制御された二つのmiRNA(miR-200c、miR-203)は、結腸上皮細胞において、幹細胞集団の自己複製の制御因子であるBMI1発現を相乗的に抑制し、増殖、オルガノイド形成および腫瘍形成性を阻害した。以上より、結腸上皮における最終分化ではmiR-200cとmiR-203が協調的に上方制御され、これらのmiRNAは協働してBMI1を抑制することにより上皮細胞の増殖を抑制すると考えられた。

  • Macrophages are primed to transdifferentiate into fibroblasts in malignant ascites and pleural effusions. Reviewed International journal

    Mamoru Ito, Michitaka Nakano, Hiroshi Ariyama, Kyoko Yamaguchi, Risa Tanaka, Yuichiro Semba, Takeshi Sugio, Kohta Miyawaki, Yoshikane Kikushige, Shinichi Mizuno, Taichi Isobe, Kenro Tanoue, Ryosuke Taguchi, Shohei Ueno, Takahito Kawano, Masaharu Murata, Eishi Baba, Koichi Akashi

    Cancer letters   532   215597 - 215597   2022.2   ISSN:0304-3835 eISSN:1872-7980

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    Cancer-associated fibroblasts (CAFs) play an important role in cancer progression. However, the origin of CAFs remains unclear. This study shows that macrophages in malignant ascites and pleural effusions (cavity fluid-associated macrophages: CAMs) transdifferentiate into fibroblast-like cells. CAMs obtained from gastrointestinal cancer patients were sorted by flow cytometry and cultured in vitro. CD45+CD14+ CAMs transdifferentiated into CD45-CD90+ fibroblast-like cells that exhibited spindle shapes. Then, cDNA microarray analysis showed that the CD45-CD90+ fibroblast-like cells (macrophage-derived CAFs: MDCAFs) had a fibroblast-specific gene expression signature and produced growth factors for epithelial cell proliferation. Human colon cancer cells transplanted into immunodeficient mice with MDCAFs formed larger tumors than cancer cells alone. Gene ontology analyses showed the involvement of TGFβ signaling and cell-matrix adhesion in MDCAFs, and transdifferentiation of CAMs into MDCAFs was canceled by inhibiting TGFβ and cell adhesion. Furthermore, the acquired genetic alterations in hematopoietic stem cells (HSCs) were shared in CAMs and MDCAFs. Taken together, CAMs could be a source of CAFs and might originate from HSCs. We propose the transdifferentiation process of CAMs into MDCAFs as a new therapeutic target for fibrosis associated with gastrointestinal cancer.

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  • Does the Use of Peripheral Immune-Related Markers Indicate Whether to Administer Pazopanib, Trabectedin, or Eribulin to Advanced Soft Tissue Sarcoma Patients? International journal

    Eijiro Shimada, Makoto Endo, Yoshihiro Matsumoto, Kenji Tsuchihashi, Mamoru Ito, Hitoshi Kusaba, Akira Nabeshima, Tomoya Nawata, Akira Maekawa, Tomoya Matsunobu, Nokitaka Setsu, Toshifumi Fujiwara, Keiichiro Iida, Makoto Nakagawa, Takeshi Hirose, Masaya Kanahori, Ryunosuke Oyama, Taichi Isobe, Hiroshi Ariyama, Kenichi Kohashi, Hidetaka Yamamoto, Yoshinao Oda, Yukihide Iwamoto, Koichi Akashi, Eishi Baba, Yasuharu Nakashima

    Journal of clinical medicine   10 ( 21 )   2021.10

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  • Prominent PD-L1-positive M2 macrophage infiltration in gastric cancer with hyper-progression after anti-PD-1 therapy

    Kyoko Yamaguchi, Kenji Tsuchihashi, Kunihiro Tsuji, Yosuke Kito, Kenro Tanoue, Hirofumi Ohmura, Mamoru Ito, Taichi Isobe, Hiroshi Ariyama, Hitoshi Kusaba, Koichi Akashi, Eishi Baba

    Medicine   100 ( 19 )   e25773 - e25773   2021.5

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  • Predictive impact of C-reactive protein to albumin ratio for recurrent or metastatic head and neck squamous cell carcinoma receiving nivolumab Reviewed

    Tanoue, Kenro, Tamura, Shingo, Kusaba, Hitoshi, Shinohara, Yudai, Ito, Mamoru, Tsuchihashi, Kenji, Shirakawa, Tsuyoshi, Otsuka, Taiga, Ohmura, Hirofumi, Isobe, Taichi, Ariyama, Hiroshi, Koreishi, Sakuya, Matsushita, Yuzo, Shimokawa, Hozumi, Tanaka, Risa, Mitsugi, Kenji, Akashi, Koichi, Baba, Eishi

    Scientific Reports   2021.2

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/S41598-021-82448-1

  • Eribulin as a first-line treatment for soft tissue sarcoma patients with contraindications for doxorubicin Reviewed

    Kenji Tsuchihashi, Hitoshi Kusaba, Tomoyasu Yoshihiro, Toshifumi Fujiwara, Nokitaka Setsu, Makoto Endo, Yoshihiro Matsumoto, Takashi Imajima, Yudai Shinohara, Mamoru Ito, Satoru Yamaga, Kenro Tanoue, Kohei Arimizu, Hirofumi Ohmura, Fumiyasu Hanamura, Kyoko Yamaguchi, Taichi Isobe, Hiroshi Ariyama, Yasuharu Nakashima, Koichi Akashi, Eishi Baba

    Scientific Reports   10 ( 1 )   2020.12

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/s41598-020-77898-y

  • Methylation of drug resistance‐related genes in chemotherapy‐sensitive Epstein–Barr virus‐associated gastric cancer Reviewed

    Hirofumi Ohmura, Mamoru Ito, Keita Uchino, Chihiro Okada, Shigeki Tanishima, Yuichi Yamada, Seiya Momosaki, Masato Komoda, Miyuki Kuwayama, Kyoko Yamaguchi, Yuta Okumura, Michitaka Nakano, Kenji Tsuchihashi, Taichi Isobe, Hiroshi Ariyama, Hitoshi Kusaba, Yoshinao Oda, Koichi Akashi, Eishi Baba

    FEBS Open Bio   10 ( 1 )   147 - 157   2020.1

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.1002/2211-5463.12765

  • Organoid Culture of Human Cancer Stem Cells. Reviewed

    Shimono Y, Mukohyama J, Isobe T, Johnston DM, Dalerba P, Suzuki A

    Methods in molecular biology (Clifton, N.J.)   2016.9

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    Organoid Culture of Human Cancer Stem Cells.

    DOI: 10.1007/7651_2016_13

  • Amrubicin monotherapy for patients with extrapulmonary neuroendocrine carcinoma after platinum-based chemotherapy Reviewed

    Kenta Nio, Shuji Arita, Taichi Isobe, Hitoshi Kusaba, Kenichi Kohashi, Tatsuhiro Kajitani, Shingo Tamura, Gen Hirano, Kenji Mitsugi, Akitaka Makiyama, Taito Esaki, Hiroshi Ariyama, Yoshinao Oda, Koichi Akashi, Eishi Baba

    CANCER CHEMOTHERAPY AND PHARMACOLOGY   75 ( 4 )   829 - 835   2015.4

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s00280-015-2706-y

  • Systemic chemotherapy for metastatic non-mucinous appendiceal adenocarcinoma: a case report and literature review Reviewed

    Kenji Tsuchihashi, Kotoe Takayoshi, Keita Uchino, Tsuyoshi Shirakawa, Hozumi Kumagai, Shingo Tamura, Masato Komoda, Taichi Isobe, Shigeo Takaishi, Hitoshi Kusaba, Shinichi Aishima, Koichi Akashi, Eishi Baba

    International Cancer Conference Journal   2 ( 1 )   36 - 40   2013.1

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s13691-012-0060-z

  • Human Nanog pseudogene8 promotes the proliferation of gastrointestinal cancer cells Reviewed

    Keita Uchino, Gen Hirano, Minako Hirahashi, Taichi Isobe, Tsuyoshi Shirakawa, Hitoshi Kusaba, Eishi Baba, Masazumi Tsuneyoshi, Koichi Akashi

    EXPERIMENTAL CELL RESEARCH   318 ( 15 )   1799 - 1807   2012.9

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.yexcr.2012.04.011

  • Improvement of quality of life and survival using self-expandable metal stent placement for severe malignant stenosis of the gastric body: A case report Reviewed

    Hozumi Kumagai, Kenta Nio, Tsuyoshi Shirakawa, Keita Uchino, Hitoshi Kusaba, Taichi Isobe, Masato Komoda, Shingo Tamura, Ryo Maeyama, Eishi Nagai, Koichi Akashi, Eishi Baba

    Journal of Medical Case Reports   6 ( 1 )   315   2012.9

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1186/1752-1947-6-315

  • Irinotecan-based combination chemotherapy for metastatic small intestinal adenocarcinoma Reviewed

    Yoshihiro Shibata, Eishi Baba, Hiroshi Ariyama, Shuji Arita, Taichi Isobe, Hitoshi Kusaba, Kenji Mitsugi, Shuji Nakano, Koichi Akashi

    ONCOLOGY LETTERS   1 ( 3 )   423 - 426   2010.5

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.3892/ol_00000074

  • Schedule-dependent synergistic interaction between gemcitabine and oxaliplatin in human gallbladder adenocarcinoma cell lines Reviewed

    Akitaka Makiyama, Baoli Qin, Keita Uchino, Yoshihiro Shibata, Shuji Arita, Taichi Isobe, Gen Hirano, Hitoshi Kusaba, Eishi Baba, Koichi Akashi, Shuji Nakano

    ANTI-CANCER DRUGS   20 ( 2 )   123 - 130   2009.2

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1097/CAD.0b013e3283218080

  • B cell activation regulates exosomal HLA production Reviewed

    Shuji Arita, Eishi Baba, Yoshihiro Shibata, Hiroaki Niiro, Shinji Shimoda, Taichi Isobe, Hitoshi Kusaba, Shuji Nakano, Mine Harada

    EUROPEAN JOURNAL OF IMMUNOLOGY   38 ( 5 )   1423 - 1434   2008.5

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1002/eji.200737694

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Books

  • 新臨床腫瘍学(改訂第7版)

    日本臨床腫瘍学会(Role:Editコアメンバー)

    南江堂  2024.4    ISBN:978-4-524-20426-7

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    Language:Japanese   Book type:Textbook, survey, introduction

Presentations

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MISC

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Professional Memberships

  • The Japanese Society of Internal Medicine

  • Japanese Cancer Association

  • Japanese Society of Medical Oncology

  • American Association for Cancer Research (AACR)

  • American Society of Clinical Oncology (ASCO)

  • International Society for Stem Cell Research (ISSCR)

  • The Japanese Society of Gastroenterology

  • AACR

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  • ASCO

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  • ESMO

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  • 日本内科学会

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  • 日本消化器病学会

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  • 日本癌学会

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  • 日本癌治療学会

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  • 日本臨床腫瘍学会

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  • 日本遺伝性腫瘍学会

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Academic Activities

  • The 83rd Annual Meeting of Japanese Cancer Association

    Role(s): Planning, management, etc.

    赤司浩一  2024.9

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    Type:Competition, symposium, etc. 

    researchmap

  • 2023 the Japanese Society of Medical Oncology annual meeting

    Role(s): Planning, management, etc.

    Eishi Baba  2023.3

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    Type:Competition, symposium, etc. 

    researchmap

  • Scientific Reports International contribution

    2022.8 - 2032.8

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    Type:Academic society, research group, etc. 

  • Screening of academic papers

    Role(s): Peer review

    2021

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    Type:Peer review 

    Number of peer-reviewed articles in foreign language journals:2

Research Projects

  • User The development of novel senolytics for gastrointestinal cancers with clonal hematopoiesis

    Grant number:24K11170  2024 - 2026

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    磯部 大地

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    Authorship:Principal investigator  Grant type:Scientific research funding

    患者由来腫瘍組織を用い、細胞老化について腫瘍細胞および微小環境中の細胞について解析を行い、治療標的候補を同定する。また腫瘍浸潤白血球に認められるクローン性造血が老化細胞の惹起する炎症にどのように影響するかについて詳らかにする。本研究により得られる知見は、がん治療において新たな治療戦略に繋がる可能性がある。

    CiNii Research

  • Characterization of immune responses in tumor microenvironment of patients with clonal hematopoiesis

    Grant number:21K07152  2021 - 2023

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    Isobe Taichi

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    Authorship:Principal investigator  Grant type:Scientific research funding

    In solid cancers, the coexistence of clonal hematopoiesis with aging is a poor prognostic factor. To elucidate its mechanism, this study aims to analyze genetic mutations in each fraction of leukocytes in both blood and tumor tissue, clarifying the relationship between clonal hematopoiesis and immune responses in the tumor microenvironment. As a result of our analyses, genetic mutations were identified in some immune cells present in both blood and tumor tissue. Currently, functional analysis of leukocytes with identified mutations is being conducted in vitro.

    CiNii Research

  • 染色体異常を起因としたヒト大腸がんの新規疾患モデルの確立

    Grant number:19K17831  2019 - 2020

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Early-Career Scientists

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    Authorship:Principal investigator  Grant type:Scientific research funding

  • 新規疾患モデルを用いた染色体変異による大腸発がんメカニズムの解明

    2019 - 2020

    公益財団法人新日本先進医療研究財団 令和元年度(第5回)研究助成金

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    Authorship:Principal investigator  Grant type:Contract research

  • 細胞順応による初期転移巣成立機構解析の基盤構築

    Grant number:15K14381  2015 - 2016

    Grants-in-Aid for Scientific Research  Grant-in-Aid for challenging Exploratory Research

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    Authorship:Coinvestigator(s)  Grant type:Scientific research funding

Educational Activities

  • Mentoring PhD students
    Mentoring students at clinical practice

Class subject

  • 個別化医療を推進する臨床腫瘍学コース

    2024.10 - Present  

  • 次世代の病理診断学

    2024.4 - Present  

  • 希少がんを含む各種がんの治療

    2023.10 - 2024.3  

  • 臨床腫瘍学の基本

    2023.4 - 2023.9   First semester

  • 基盤がん医療

    2021.10 - Present   Second semester

FD Participation

  • 2022.12   Role:Participation   Title:医学系学府教育FD「医学系大学院プログラムの進化と深化をめざして」

  • 2022.8   Role:Participation   Title:医学部医学科・生命科学科FD「医学教育分野別評価受審の振り返りについて」

  • 2021.12   Role:Participation   Title:医学系学府教育FD「学術論文の購読と投稿とこれから」

Other educational activity and Special note

  • 2023  Class Teacher  学部

  • 2022  Class Teacher  学部

Travel Abroad

  • 2012.5 - 2018.9

    Staying countory name 1:United States   Staying institution name 1:Stanford University

  • 2010.4 - 2010.5

    Staying countory name 1:United States   Staying institution name 1:Stanford University

Specialized clinical area

  • Biology / Medicine, Dentistry and Pharmacy / Internal Medicine / General Internal Medicine (including psychosomatic medicine)

    腫瘍内科

Clinician qualification

  • 総合内科専門医

    The Japanese Society of Internal Medicine(JSIM)

  • 認定内科医

    The Japanese Society of Internal Medicine(JSIM)

  • Preceptor

    The Japanese Society of Internal Medicine(JSIM)

  • Certifying physician

    日本がん治療認定医機構

Year of medical license acquisition

  • 2003

Notable Clinical Activities

  • 腫瘍内科