Updated on 2026/08/07

Information

 

写真a

 
OCHIAI KOTARO
 
Organization
Institute for Materials Chemistry and Engineering Department of Fundamental Organic Chemistry Assistant Professor
Title
Assistant Professor

Papers

  • Design, synthesis and structural development of nonsecosteroidal VDR ligands based on the C,C′-diphenyl-m-carborane scaffold Reviewed

    Hansaka Nirupama Thilakarathne Narasinghe Mudiyanselage, Takashi Misawa, Kotaro Ochiai, Yosuke Demizu, Yuya Hanazono, Nobutoshi Ito, Shinya Fujii

    European Journal of Medicinal Chemistry   302 ( Pt 2 )   118320 - 118320   2026.1   ISSN:0223-5234

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Elsevier BV  

    Nonsecosteroidal vitamin D receptor (VDR) ligands are promising drug candidates for multiple diseases, including osteoporosis, psoriasis, and certain cancers. We report here the design, synthesis, biological evaluation and crystallographic analysis of a series of 1,7-diphenyl-m-carborane derivatives as novel nonsecosteroidal VDR ligands. We found that the 1,7-diphenyl-m-carborane framework is a promising hydrophobic core of VDR ligands, and developed a series of potent compounds such as 12b and 13a. Interestingly, compounds with different chain length exhibited similar potencies. X-Ray co-crystal structure analysis revealed that the developed compounds exhibited various different interaction patterns depending on the structure of the carboxyalkyl chain, indicating that the ligand-binding pocket of the VDR possesses sufficient conformational plasticity to accommodate a wide variety of ligands without compromising activity. The developed carborane derivatives are promising leads for further structural development, and the findings on the diversity of binding modes will be helpful in the design of other VDR ligands.

    DOI: 10.1016/j.ejmech.2025.118320

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  • Modular Synthesis of Unsymmetrical 1,1’‐Disubstituted Ferrocenes by Sequential Suzuki‐Miyaura Cross‐Coupling of 1,1’‐Diborylferrocene Reviewed

    Kotaro Ochiai, Ryo Yonezawa, Shinya Fujii

    Chemistry – A European Journal   0 ( e202501026 )   1 - 5   2025.6   ISSN:0947-6539 eISSN:1521-3765

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Wiley  

    Abstract

    Unsymmetrical 1,1’‐disubstituted ferrocene is a versatile scaffold for various functional molecules, including organic electronics, catalysts, and bioactive molecules. Herein, we report a facile synthesis of unsymmetrical 1,1’‐disubstituted ferrocene derivatives based on the desymmetrization of 1,1’‐diborylferrocene. We found that Suzuki‐Miyaura cross‐coupling (SMCC) reaction using 1,1’‐bis(Bpin)ferrocene affords the mono‐substituted product without significant loss of the second boryl group. Then, second SMCC reaction of the obtained 1‐aryl‐1’‐(Bpin)ferrocene affords the desired unsymmetrical 1,1’‐disubstituted ferrocene derivatives in reasonable yields. This method provides a versatile synthetic platform for tuning the electronic and steric properties of functional ferrocene derivatives and for the structural development of bioactive compounds.

    DOI: 10.1002/chem.202501026

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  • Structure-activity relationship and crystallographic analyses of non-secosteroidal vitamin D receptor ligands bearing diphenylsilane core as a hydrophobic pharmacophore Reviewed

    Hansaka Nirupama Thilakarathne Narasinghe Mudiyanselage, Takashi Misawa, Kotaro Ochiai, Yosuke Demizu, Yuya Hanazono, Nobutoshi Ito, Shinya Fujii

    Bioorganic & Medicinal Chemistry   128   118261 - 118261   2025.5   ISSN:0968-0896

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Elsevier BV  

    Vitamin D receptor (VDR) is an attractive target of drug discovery for multiple diseases. In this study, we systematically designed and synthesized a series of diphenylsilane derivatives with diverse hydrophobic substituents and investigated their structure–activity relationship (SAR) as VDR agonists. The SAR study revealed that the activity is dependent on the type of substituent and the position of substitution, and the diethyl-di-m-tolylsilane scaffold was identified as the most suitable hydrophobic core structure of this type of VDR ligands. Interestingly, the small structural difference between n-propyl and allyl substituents resulted in a large difference in the activity. Comparison of the co-crystal structures of 14 diphenylsilane compounds, including less potent compounds, bound to the rat VDR ligand-binding domain suggested that the differences in activity are due to a combination of factors, including differences in hydrophilic and hydrophobic interactions, and ligand conformations.

    DOI: 10.1016/j.bmc.2025.118261

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  • Design, Synthesis, and Evaluation of B-(Trifluoromethyl)phenyl Phosphine–Borane Derivatives as Novel Progesterone Receptor Antagonists Reviewed

    Yu Miyajima, Kotaro Ochiai, Shinya Fujii

    Molecules   2024.4   ISSN:1420-3049

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    Language:English   Publishing type:Research paper (scientific journal)  

    <jats:p>We previously revealed that phosphine–boranes can function as molecular frameworks for biofunctional molecules. In the present study, we exploited the diversity of available phosphines to design and synthesize a series of B-(trifluoromethyl)phenyl phosphine–borane derivatives as novel progesterone receptor (PR) antagonists. We revealed that the synthesized phosphine–borane derivatives exhibited LogP values in a predictable manner and that the P–H group in the phosphine–borane was almost nonpolar. Among the synthesized phosphine–boranes, which exhibited PR antagonistic activity, B-(4-trifluoromethyl)phenyl tricyclopropylphosphine–borane was the most potent with an IC50 value of 0.54 μM. A docking simulation indicated that the tricyclopropylphosphine moiety plays an important role in ligand–receptor interactions. These results support the idea that phosphine–boranes are versatile structural options in drug discovery, and the developed compounds are promising lead compounds for further structural development of next-generation PR antagonists.</jats:p>

    DOI: 10.3390/molecules29071587

  • Structural Development of Androgen Receptor Antagonists Using Phenylferrocene Framework as a Hydrophobic Pharmacophore Reviewed

    Kotaro Ochiai, Ryo Yonezawa, Shinya Fujii

    ChemMedChem   2024.3   ISSN:1860-7179

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    <jats:title>Abstract</jats:title><jats:p>We previously identified nitrophenylferrocenes and cyanophenylferrocenes as promising lead structures of novel androgen receptor (AR) antagonists, based on the structural similarity between ferrocene and the steroidal skeleton. In the present research, we explored the structure‐activity relationship (SAR) of phenylferrocene derivatives. Introduction of a hydrophobic substituent such as a chlorine atom at the 2‐position or 3‐position of phenylferrocene derivatives significantly increased the antagonistic activity toward wild‐type AR, and among the synthesized compounds, 3‐chloro‐4‐cyanophenylferrocene (<jats:bold>29</jats:bold>) exhibited the most potent anti‐proliferative activity toward the androgen‐dependent growth of SC‐3 cells expressing wild‐type AR (IC<jats:sub>50</jats:sub> 14 nM). Like conventional antiandrogens such as hydroxyflutamide, the major active metabolite of flutamide, compound <jats:bold>29</jats:bold> exhibited agonistic activity toward T877A‐AR, a mutant AR expressed in human prostate cancer cell line LNCaP. Notably, however, the 2‐chloro isomer <jats:bold>27</jats:bold> showed potent antagonistic activity toward wild‐type AR (IC<jats:sub>50</jats:sub> 49 nM) and also exhibited antagonistic activity toward T877A‐AR. Our SAR data should prove helpful for the development of new‐generation AR antagonists based on phenylferrocene as candidate agents to treat drug‐resistant prostate cancer.</jats:p>

    DOI: 10.1002/cmdc.202400040

  • Synthesis and Properties of Azahomocorannulenyl Cations and Radicals Reviewed

    Yosuke Hamamoto, Kotaro Ochiai, Li Yongxin, Enrico Tapavicza, Shingo Ito

    Angewandte Chemie International Edition   2024.2   ISSN:1433-7851

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    Language:English   Publishing type:Research paper (scientific journal)  

    <jats:title>Abstract</jats:title><jats:p>Cycloheptatrienyl (tropyl) molecules are representative non‐alternant hydrocarbons that offer interesting chemistry because of their unique structures and properties. However, there have been a limited number of polycyclic aromatic tropyl cations and radicals reported in the literature. Herein, we report the synthesis of a series of azahomocorannulene derivatives, where the key reactions are a 1,3‐dipolar cycloaddition of polycyclic aromatic azomethine ylides with dibenzotropone and a subsequent palladium‐catalyzed cyclization. X‐ray diffraction analysis revealed that the obtained azahomocorannulenyl cation and radical adopt planar structures and exhibit unique packing structures. Their electronic and optical properties were investigated experimentally and theoretically to reveal their aromatic character.</jats:p>

    DOI: 10.1002/anie.202319022

  • Physicochemical characterization of B-hydroxyphenyl phosphine borane derivatives and their evaluation as nuclear estrogen receptor ligands Reviewed

    Yu Miyajima, Tomomi Noguchi-Yachide, Kotaro Ochiai, Shinya Fujii

    RSC Medicinal Chemistry   2023.10   ISSN:2632-8682

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    Language:English   Publishing type:Research paper (scientific journal)  

    <jats:p>This is the first report of biologically active <jats:italic>B</jats:italic>-substituted phosphineborane derivatives. Phosphine boranes could be versatile structural options in medicinal chemistry for expanding the chemical space available for drug discovery.</jats:p>

    DOI: 10.1039/d3md00350g

  • Pyridine-Fused Azacorannulene: Fine-Tuning of the Structure and Properties of Nitrogen-Embedded Buckybowls Reviewed

    Kimihiro Nakamura, Kotaro Ochiai, Ayaka Yubuta, Dan He, Daigo Miyajima, Shingo Ito

    Precision Chemistry   2023.2   ISSN:2771-9316

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:American Chemical Society ({ACS})  

    DOI: 10.1021/prechem.3c00004

  • π‐Extended Pyrrole‐Fused Heteropine: Synthesis, Properties, and Application in Organic Field‐Effect Transistors Reviewed

    Weifan Wang, Fiona Hanindita, Yusei Tanaka, Kotaro Ochiai, Hiroyasu Sato, Li Yongxin, Takuma Yasuda, Shingo Ito

    Angewandte Chemie International Edition   62 ( 8 )   e202218176   2023.2   ISSN:1433-7851 eISSN:1521-3773

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Wiley  

    Sulfur-embedded polycyclic aromatic compounds have been used as building blocks for numerous organic semiconductors over the past few decades. While the success is based on thiophene-containing compounds, aromatic compounds that contain thiepine, a sulfur-containing seven-membered-ring arene, has been less well investigated. Here we report the synthesis and properties of π-extended pyrrole-fused heteropine compounds such as thiepine and oxepine. A π-extended pyrrole-fused thiepine exhibited a “pitched π-stacking” structure in the crystal, and exhibited a high charge carrier mobility of up to 1.0 cm<sup>2</sup> V<sup>−1</sup> s<sup>−1</sup> in single-crystal field-effect transistors.

    DOI: 10.1002/anie.202218176

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Presentations

Research Projects

  • フェロセンの環回転を利用した新規生体機能性分子の創製

    Grant number:22KJ1209  2023.3 - 2025.3

    Grants-in-Aid for Scientific Research  Grant-in-Aid for JSPS Fellows

    落合 幸太郎

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    Grant type:Scientific research funding

    フェロセンの三次元構造および回転特性に着目した設計戦略に基づく新規生体機能性分子の開発することで、構造展開オプションとしての有用性の提案し、生命科学におけるケミカルスペースの拡大を目的とする。
    本研究では、フェロセンの回転自由度をチューニングすることで、受容体のポケットに合わせて構造が変化する受容体リガンドや受容体選択性の向上を可能にする新規生物活性化合物を創製する。

    CiNii Research