Updated on 2024/07/28

Information

 

写真a

 
NOSHITA KOJI
 
Organization
Faculty of Science Department of Biology Assistant Professor
Plant Frontier Research Center (Joint Appointment)
School of Sciences Department of Biology(Joint Appointment)
Graduate School of Systems Life Sciences Department of Systems Life Sciences(Joint Appointment)
Joint Graduate School of Mathematics for Innovation (Joint Appointment)
Title
Assistant Professor
Contact information
メールアドレス
Profile
生物や生物のつくる構造物のかたちを進化形態学的,形態測定学的観点から,幅広く興味をもって研究をしています. 特に,動物(腹足類(巻貝),マウス),植物(ダイズ,コムギ,キャッサバ),人工物(土器)などを対象に数理モデルや画像解析,計測手法の開発を活用した解析を進めています.

Degree

  • Ph.D., Kyushu University

  • M.S., Kyushu University

  • B.S., Shizuoka University

Papers

  • Macro-Scale Population Patterns in the Kofun Period of the Japanese Archipelago: Quantitative Analysis of a Larger Sample of Three-Dimensional Data from Ancient Human Crania

    Hisashi Nakao, Akihiro Kaneda, Kohei Tamura, Koji Noshita, Tomomi Nakagawa

    Humans   4 ( 2 )   131 - 147   2024.4

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.3390/humans4020008

  • Demic Diffusion of the Yayoi People in the Japanese Archipelago

    Hisashi Nakao, Tomomi Nakagawa, Akihiro Kaneda, Kohei Tamura, Koji Noshita

    Letters on Evolutionary Behavioral Science   14 ( 2 )   2023.11

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.5178/lebs.2023.111

  • Network feature-based phenotyping of leaf venation robustly reconstructs the latent space Reviewed

    Kohei Iwamasa, Koji Noshita

    PLOS Computational Biology   2023.7

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.1371/journal.pcbi.1010581

  • Theoretical morphological analysis of differential morphospace occupation patterns for terrestrial and aquatic gastropods Reviewed

    Amane Araki, Koji Noshita

    Evolution   2023.7

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/evolut/qpad110

  • Smoking enhances the expression of angiotensin‐converting enzyme 2 involved in the efficiency of severe acute respiratory syndrome coronavirus 2 infection Invited Reviewed International journal

    67   22 - 31   2023.6

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/1348-0421.13034

  • Theoretical morphological analysis of differential morphospace occupation patterns for terrestrial and aquatic gastropods Reviewed International journal

    #Araki, A., Noshita, K.

    Evolution   2023.6

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/evolut/qpad110

  • Exploring the mechanical and morphological rationality of tree branch structure based on 3D point cloud analysis and the finite element method Reviewed

    Satoru Tsugawa, Kaname Teratsuji, Fumio Okura, Koji Noshita, Masaki Tateno, Jingyao Zhang, Taku Demura

    Scientific Reports   12 ( 1 )   2022.12

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/s41598-022-08030-5

  • Smoking enhances the expression of angiotensin-converting enzyme 2 involved in the efficiency of severe acute respiratory syndrome coronavirus 2 infection. Reviewed International journal

    Rigel Suzuki, Yuki Ono, Koji Noshita, Kwang Su Kim, Hayato Ito, Yuhei Morioka, Tomokazu Tamura, Daisuke Okuzaki, Tetsuzo Tagawa, Tomoyoshi Takenaka, Tomoharu Yoshizumi, Teppei Shimamura, Shingo Iwami, Takasuke Fukuhara

    Microbiology and immunology   67 ( 1 )   22 - 31   2022.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/1348-0421.13034

  • A proposal of a new automated method for SfM/MVS 3D reconstruction through comparisons of 3D data by SfM/MVS and handheld laser scanners Reviewed International journal

    @Kaneda, A., @Nakagawa, T., @Tamura, K., Noshita, K., @Nakao, H.

    PLoS ONE   17   e0270660   2022.7

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    Language:Japanese   Publishing type:Research paper (scientific journal)  

    DOI: 10.1371/journal.pone.0270660

  • A proposal of a new automated method for SfM/MVS 3D reconstruction through comparisons of 3D data by SfM/MVS and handheld laser scanners Reviewed

    Akihiro Kaneda, Tomomi Nakagawa, Kohei Tamura, Koji Noshita, Hisashi Nakao

    PLOS ONE   17 ( 7 )   e0270660 - e0270660   2022.7

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.1371/journal.pone.0270660

  • Tracing founder haplotypes of Japanese apple varieties: application in genomic prediction and genome-wide association study Reviewed International journal

    Mai F. Minamikawa, Miyuki Kunihisa, Koji Noshita, Shigeki Moriya, Kazuyuki Abe, Takeshi Hayashi, Yuichi Katayose, Toshimi Matsumoto, Chikako Nishitani, Shingo Terakami, Toshiya Yamamoto, Hiroyoshi Iwata

    Horticulture Research   8 ( 1 )   49 - 49   2021.12

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/s41438-021-00485-3

  • Detection of significant antiviral drug effects on COVID-19 with reasonable sample sizes in randomized controlled trials: A modeling study Reviewed

    Shoya Iwanami, Keisuke Ejima, Kwang Su Kim, Koji Noshita, Yasuhisa Fujita, Taiga Miyazaki, Shigeru Kohno, Yoshitsugu Miyazaki, Shimpei Morimoto, Shinji Nakaoka, Yoshiki Koizumi, Yusuke Asai, Kazuyuki Aihara, Koichi Watashi, Robin N. Thompson, Kenji Shibuya, Katsuhito Fujiu, Alan S. Perelson, Shingo Iwami, Takaji Wakita

    PLOS Medicine   18 ( 7 )   e1003660 - e1003660   2021.7

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.1371/journal.pmed.1003660

  • GIS-Based Analysis for UAV-Supported Field Experiments Reveals Soybean Traits Associated With Rotational Benefit Reviewed

    Yuya Fukano, Wei Guo, Naohiro Aoki, Shinjiro Ootsuka, Koji Noshita, Kei Uchida, Yoichiro Kato, Kazuhiro Sasaki, Shotaka Kamikawa, Hirofumi Kubota

    Frontiers in Plant Science   12   2021.5

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.3389/fpls.2021.637694

  • Phylogeography and shell morphology of the pelagic snail Limacina helicina in the Okhotsk Sea and western North Pacific Reviewed

    Keisuke Shimizu, Koji Noshita, Katsunori Kimoto, Takenori Sasaki

    Marine Biodiversity   51 ( 2 )   2021.4

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1007/s12526-021-01166-z

  • Climate-smart crops: key root anatomical traits that confer flooding tolerance Reviewed

    Takaki Yamauchi, Koji Noshita, Nobuhiro Tsutsumi

    Breeding Science   71 ( 1 )   51 - 61   2021.1

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1270/jsbbs.20119

  • Field‐based individual plant phenotyping of herbaceous species by unmanned aerial vehicle Reviewed

    10 ( 21 )   12318 - 12326   2020.11

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    Language:Others   Publishing type:Research paper (scientific journal)  

    DOI: 10.1002/ece3.6861

  • Field‐based individual plant phenotyping of herbaceous species by unmanned aerial vehicle Reviewed International journal

    10   12318 - 12326   2020.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1002/ece3.6861

  • A theoretical morphological model for quantitative description of the three-dimensional floral morphology in water lily (Nymphaea) Reviewed

    Shiryu Kirie, Hideo Iwasaki, Koji Noshita, Hiroyoshi Iwata

    PLOS ONE   15 ( 10 )   e0239781 - e0239781   2020.10

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1371/journal.pone.0239781

  • Application of deep learning for the occupational health of VDT workers Reviewed

    Mitsuo Uchida, Koji Noshita, Hiroshi Koyama

    Sangyo eiseigaku zasshi = Journal of occupational health   61 ( 6 )   256 - 260   2019.11

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1539/sangyoeisei.2018-040-C

  • Comparison of shape quantification methods for genomic prediction, and genome-wide association study of sorghum seed morphology Reviewed

    Lisa Sakamoto, Hiromi Kajiya-Kanegae, Koji Noshita, Hideki Takanashi, Masaaki Kobayashi, Toru Kudo, Kentaro Yano, Tsuyoshi Tokunaga, Nobuhiro Tsutsumi, Hiroyoshi Iwata

    PloS one   14 ( 11 )   2019.11

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1371/journal.pone.0224695

  • What is cost-efficient phenotyping? Optimizing costs for different scenarios Reviewed

    Plant Science   282   14 - 22   2019.5

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.plantsci.2018.06.015

  • Genotype-aggregated planting improves yield in Jerusalem artichoke (Helianthus tuberosus) due to self/non-self-discrimination Reviewed

    Yuya Fukano, Wei Guo, Koji Noshita, Shoko Hashida, Shotaka Kamikawa

    Evolutionary Applications   12 ( 3 )   508 - 518   2019.3

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1111/eva.12735

  • Application of a deep learning for occupational health and safety recognition a pilot study in a logistics industry Reviewed

    Mitsuo Uchida, Koji Noshita, Yasuhiro Tsutsui, Hiroshi Koyama

    Sangyo eiseigaku zasshi = Journal of occupational health   60 ( 6 )   191 - 195   2018.12

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1539/sangyoeisei.2018-022-C

  • Characterization of peach tree crown by using high-resolution images from an unmanned aerial vehicle Reviewed

    Yue Mu, Yuichiro Fujii, Daisuke Takata, Bangyou Zheng, Koji Noshita, Kiyoshi Honda, Seishi Ninomiya, Wei Guo

    Horticulture Research   5 ( 1 )   2018.12

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/s41438-018-0097-z

  • Phylogeography of the pelagic snail Limacina helicina (Gastropoda Thecosomata) in the subarctic western North Pacific Reviewed

    Keisuke Shimizu, Katsunori Kimoto, Koji Noshita, Masahide Wakita, Tetsuichi Fujiki, Takenori Sasaki

    Journal of Molluscan Studies   84 ( 1 )   30 - 37   2018.2

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1093/mollus/eyx040

  • Aerial imagery analysis – Quantifying appearance and number of sorghum heads for applications in breeding and agronomy Reviewed

    871   2018.1

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    Language:English   Publishing type:Research paper (scientific journal)  

    Sorghum (Sorghum bicolor L. Moench) is a C4 tropical grass that plays an essential role in providing nutrition to humans and livestock, particularly in marginal rainfall environments. The timing of head development and the number of heads per unit area are key adaptation traits to consider in agronomy and breeding but are time consuming and labor intensive to measure. We propose a two-step machine-based image processing method to detect and count the number of heads from high-resolution images captured by unmanned aerial vehicles (UAVs) in a breeding trial. To demonstrate the performance of the proposed method, 52 images were manually labeled; the precision and recall of head detection were 0.87 and 0.98, respectively, and the coefficient of determination (R
    2
    ) between the manual and new methods of counting was 0.84. To verify the utility of the method in breeding programs, a geolocation-based plot segmentation method was applied to pre-processed ortho-mosaic images to extract >1000 plots from original RGB images. Forty of these plots were randomly selected and labeled manually; the precision and recall of detection were 0.82 and 0.98, respectively, and the coefficient of determination between manual and algorithm counting was 0.56, with the major source of error being related to the morphology of plants resulting in heads being displayed both within and outside the plot in which the plants were sown, i.e., being allocated to a neighboring plot. Finally, the potential applications in yield estimation from UAV-based imagery from agronomy experiments and scouting of production fields are also discussed.

    DOI: 10.3389/fpls.2018.01544

  • A heart-brain-kidney network controls adaptation to cardiac stress through tissue macrophage activation Reviewed

    Katsuhito Fujiu, Munehiko Shibata, Yukiteru Nakayama, Fusa Ogata, Sahohime Matsumoto, Koji Noshita, Shingo Iwami, Susumu Nakae, Issei Komuro, Ryozo Nagai, Ichiro Manabe

    Nature medicine   23 ( 5 )   611 - 622   2017.5

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1038/nm.4326

  • Geometric analysis and estimation of the growth rate gradient on gastropod shells Reviewed

    Koji Noshita, Keisuke Shimizu, Takenori Sasaki

    Journal of Theoretical Biology   389   11 - 19   2016.1

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.jtbi.2015.10.011

  • Quantification and geometric analysis of coiling patterns in gastropod shells based on 3D and 2D image data Reviewed

    Koji Noshita

    Journal of Theoretical Biology   363   93 - 104   2014.12

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.jtbi.2014.08.010

  • Functional constraints on coiling geometry and aperture inclination in gastropods Reviewed

    Koji Noshita, Takahiro Asami, Takao Ubukata

    Paleobiology   38 ( 2 )   322 - 334   2012.3

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1666/10060.1

  • Spiral Shell Form A computer software package for theoretical morphological analysis of spiral shell form Reviewed

    Koji Noshita

    Geoscience Reports of the Shizuoka University   ( 37 )   57 - 73   2010.7

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    Language:English   Publishing type:Research paper (scientific journal)  

  • Model-based plant phenomics on morphological traits using morphometric descriptors Invited Reviewed International journal

    Noshita, K., #Murata, H., @Kirie, S.

    BREEDING SCIENCE   72 ( 1 )   19 - 30   1900

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    Language:English   Publishing type:Research paper (scientific journal)  

    DOI: 10.1270/jsbbs.21078

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Books

  • カタチの由来、データの未来 : 三次元計測の人類史学

    中尾, 央

    勁草書房  2024.2 

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    Responsible for pages:総ページ数:xii, 194p   Language:Japanese  

  • 植物の超階層生物学 : ゲノミクス×フェノミクス×生態学でひもとく多様性

    種生物学会, 佐藤, 安弘, 村中, 智明

    文一総合出版  2023.8 

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    Responsible for pages:総ページ数:339p, 図版ivp   Language:Japanese  

  • Stream Fish Biodiversity and the Effects of Plantations in the Bintulu Region, Sarawak

    Yuichi Kano, Jason Hon, Khairulazman Sulaiman Mohd Khairulazman Sulaiman, Mitsuhiro Aizu, Koji Noshita, Hiromitsu Samejima

    Springer International Publishing  2020.1 

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    Responsible for pages:235-274   Language:English  

    DOI: 10.1007/978-981-13-7513-2_13

  • 新スマート農業 : 進化する農業情報利用

    農業情報学会

    農林統計出版  2019.5 

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    Responsible for pages:総ページ数:xxiv, 500p   Language:Japanese  

  • 3D Visualization of Calcified and Non-calcified Molluscan Tissues Using Computed Tomography. in Biomineralization

    Sasaki, T., Maekawa, Y., Takeda, Y., Atsushiba, M., Chen, C., Noshita, K., Uesugi, K. and Hoshino, M.( Role: Joint author)

    Springer, Singapore  2018.10 

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    Responsible for pages:pp. 83-93.   Language:Japanese   Book type:Scholarly book

    DOI: 10.1007/978-981-13-1002-7_9

  • 幾何学的形態測定学とRを使った解析例 in 文化進化の考古学(中尾 央,松木 武彦,三中 信宏 編)

    野下 浩司,田村 光平( Role: Joint author)

    勁草書房  2017.8 

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    Language:Japanese   Book type:Scholarly book

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Presentations

  • Plant phenotyping methods using image analysis, machine learning, mathematics, and morphometrics Invited International conference

    Noshita, K.

    ICIAM WIS2023  2023.9 

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    Event date: 2024.5

    Language:English   Presentation type:Oral presentation (general)  

    Country:Japan  

  • ktch: モデルベース形態測定学向けPythonパッケージ

    野下 浩司

    数理生物学会  2023.9 

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    Event date: 2024.5

    Language:Japanese   Presentation type:Oral presentation (general)  

    Country:Japan  

  • ktch: モデルベース形態測定学向けPythonパッケージ

    野下 浩司

    生態学会  2024.3 

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    Event date: 2024.5

    Language:Japanese   Presentation type:Oral presentation (general)  

    Country:Japan  

  • Three-dimensional leaf edge reconstruction using a combination of two- and three-dimensional phenotyping approaches Invited International conference

    Noshita, K.

    Summit on the Frontiers of Plant Phenomics  2023.12 

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    Event date: 2024.5

    Language:English   Presentation type:Oral presentation (general)  

    Country:Japan  

  • 葉輪郭再構築への2次元-3次元協調的アプローチ

    #村田 英和,野下 浩司.

    生態学会  2023.3 

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    Event date: 2023.6

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:オンライン,ホスト:東北大学   Country:Japan  

  • Characterization of foliage structures using persistent homology analysis International conference

    Noshita, K.

    IPPS2022  2022.9 

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    Event date: 2023.6

    Language:English   Presentation type:Oral presentation (general)  

    Country:Japan  

  • 細胞形状と動きの形態測定学的解析

    野下 浩司

    数理生物学会  2022.9 

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    Event date: 2023.6

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:オンライン,ホスト:明治大学   Country:Japan  

  • 腹足類殻の異なる形態空間占有パターンの理論形態学的解析

    #荒木 周,野下 浩司

    第172回古生物学会例会  2023.2 

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    Event date: 2023.6

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:九州大学 馬出キャンパス,福岡   Country:Japan  

  • フェノタイピングの問題としての「かたち」の定量化:暗黙知の形式化へ向けて Invited

    野下 浩司

    社会課題は数理科学で解決できる!? -試みと課題-  2021.10 

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    Event date: 2021.10

    Language:Japanese   Presentation type:Symposium, workshop panel (public)  

    Venue:名古屋大学   Country:Japan  

  • 「かたち」のモデル化・定量化のための幾何学 Invited

    野下 浩司

    生命医科学における数理科学の最前線:データサイエンスから代数・幾何・記号学まで - さらなる展開を目指して  2021.10 

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    Event date: 2021.10

    Language:Japanese   Presentation type:Symposium, workshop panel (public)  

    Country:Japan  

  • 草姿・草型のフェノタイピング:3次元計測と「かたち」の数理モデル化 Invited

    野下 浩司

    日本植物学会 第85回大会 シンポジウム 植物科学を変える先端分析技術と大規模データ統合解析  2021.9 

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    Event date: 2021.9

    Language:Japanese   Presentation type:Symposium, workshop panel (public)  

    Venue:オンライン,ホスト:東京都立大学   Country:Japan  

  • 輪郭形状解析におけるレジストレーション:軸と対称不整合についての比較

    野下 浩司

    数理生物学会  2021.9 

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    Event date: 2021.9

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:オンライン,ホスト:宮崎大学   Country:Japan  

  • Morphometrics and its applications Invited International conference

    Noshita, K.

    Mathematical methods for the studies of flow, shape, and dynamics  2021.8 

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    Event date: 2021.8

    Language:English   Presentation type:Symposium, workshop panel (public)  

    Country:Japan  

  • 植物の「かたち」を測る・モデル化する:数理モデルの構築・定量化の理論提案・植物フェノタイピング技術の開発

    野下 浩司

    超分野植物科学研究会(TDPS) 第1回研究会  2021.6 

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    Event date: 2021.6

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:オンライン   Country:Japan  

  • 葉群の空間パターンとしての草姿・草型の定量的表現:相同性が自明でない場合の形態測定学に向けて.

    野下 浩司

    第16回 生物数学の理論とその応用 ~生命現象の定量的理解に向けて~  2020.1 

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    Event date: 2021.6

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:京都大学 数理解析研究所   Country:Japan  

  • Quantitative Representation of Plant Style as Spacial Pattern of Foliage for Morphometrics on ill-defined Homology International conference

    Noshita, K.

    Phenome2020  2020.2 

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    Event date: 2021.6

    Language:English   Presentation type:Oral presentation (general)  

    Country:United States  

  • “異常巻き”を含む貝殻巻きパタンの定量的解析・モデル化

    野下 浩司

    2020年度日本数理生物学会年会  2020.9 

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    Event date: 2021.6

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:オンライン,ホスト:名古屋大学   Country:Japan  

  • kaigara:貝殻理論形態学Pythonパッケージ

    野下 浩司

    古生物学会  2021.2 

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    Event date: 2021.6

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:オンライン,ホスト:横浜国立大学   Country:Japan  

  • 3次元空間における植物葉面再構築と輪郭形状解析

    野下 浩司

    日本生態学会第68回全国大会  2021.3 

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    Event date: 2021.6

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:オンライン,ホスト:岡山   Country:Japan  

  • 草姿・草型の数理モデル化と高効率フェノタイピングへの応用 Invited

    野下 浩司

    農業情報学会2021年度 年次大会  2021.5 

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    Event date: 2021.5

    Language:Japanese   Presentation type:Symposium, workshop panel (public)  

    Venue:オンライン   Country:Japan  

  • 軟体動物殻形態の理論モデルによる「かたち」と「かたち作り」の定量化 Invited

    野下 浩司

    第14回バイオミネラリゼーションワークショップ  2019.11 

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    Event date: 2019.11

    Language:Japanese   Presentation type:Oral presentation (general)  

    Country:Japan  

  • 植物フェノタイピング向け仮想データセットの生成と解析

    野下 浩司

    定量生物学の会 北海道キャラバン2019  2019.11 

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    Event date: 2019.11

    Language:Japanese  

    Venue:北海道   Country:Japan  

  • A unified framework for image-based plant phenotyping under controlled growth environment: From image acquisition to phenotype interpretation International conference

    6th International Plant Phenotyping Symposium  2019.10 

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    Event date: 2019.10

    Language:English   Presentation type:Oral presentation (general)  

    Country:China  

  • Outline-based morphometrics and geometric analysis for leaf shapes in a three-dimensional space International conference

    Noshita, K., Guo, W.

    6th International Plant Phenotyping Symposium  2019.10 

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    Event date: 2019.10

    Language:English  

    Country:China  

  • 3D high through-put phenotyping for Smart agriculture Invited International conference

    Noshita, K

    International Smart Agriculture Symposium  2019.9 

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    Event date: 2019.9

    Language:English   Presentation type:Oral presentation (general)  

    Country:Japan  

  • 植物形態の計測とモデル化

    野下 浩司

    日本数理生物学会  2019.9 

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    Event date: 2019.9

    Language:Japanese   Presentation type:Symposium, workshop panel (public)  

    Venue:東京   Country:Japan  

  • 貝殻巻きパタンの定量化:”異常巻き”への拡張

    野下 浩司

    日本生態学会  2019.3 

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    Event date: 2019.6

    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:神戸   Country:Japan  

  • 3D Point Cloud Phenotyping of Soybean Growth in Early Stage International conference

    Noshita, K., Guo, W., Kaga A. and Iwata, H.

    PAG XXV  2017.1 

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    Event date: 2019.6

    Language:English  

    Country:United States  

  • An image processing pipeline for acquiring 3D morphological information from “noisy” point cloud data Invited International conference

    2017.9 

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    Event date: 2019.6

    Language:English   Presentation type:Oral presentation (general)  

    Venue:Ehime Univ.   Country:Japan  

  • 生物を通して読み解く形態と機能の関係性 Invited

    野下 浩司

    日本ロボット学会  2018.7 

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    Event date: 2019.6

    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Country:Japan  

  • Model-based morphometrics for plant phenotyping International conference

    Noshita, K. and Guo, W.

    SMB-JSMB 2018  2018.7 

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    Event date: 2019.6

    Language:English   Presentation type:Oral presentation (general)  

    Country:Australia  

  • 野外における植物3次元形態の再構築と計測 Invited

    野下浩司,郭  威

    電気学会 電子・情報・システム部門大会  2018.9 

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    Event date: 2019.6

    Language:Japanese  

    Country:Japan  

  • Model-based phenotyping of soybean canopies in early stage under a field condition with a photogrammetry studio International conference

    Noshita, K., Guo, W.

    IPPS2018  2018.10 

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    Event date: 2019.6

    Language:English  

    Country:Australia  

  • 3D field phenotyping of canopy development in soybean Invited International conference

    Noshita, K.

    PBIO Seminar  2018.11 

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    Event date: 2019.6

    Language:English   Presentation type:Oral presentation (general)  

    Country:United States  

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MISC

  • “かたち”のフェノーム数理解析への汎用形態記述子によるアプローチ

    野下 浩司

    生体の科学   2023.4

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    Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

    DOI: 10.11477/mf.2425201656

  • 社会医学研究におけるAIの活用例 (研究者の最新動向)

    内田 満夫, 野下 浩司, 浅尾 高行, 小山 洋

    Precision medicine = プレシジョンメディシン   2020.5

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    Language:Japanese  

  • .植物科学の「人工知能」との関わり方を考える Reviewed

    大倉 史生, 水谷 未耶, 野下 浩司, 戸田 陽介

    植物科学の最前線   2020.1

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    Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (scientific journal)  

    DOI: 10.24480/bsj-review.11c2.00191

  • 社会医学領域において進めるAI研究

    内田 満夫, 野下 浩司, 浅尾 高行, 小山 洋

    アグリバイオ = Agricultural biotechnology   2020.1

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    Language:Japanese  

  • 社会医学領域において進めるAI研究 (研究者の最新動向)

    内田 満夫, 野下 浩司, 浅尾 高行, 小山 洋

    Precision medicine = プレシジョンメディシン   2019.11

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    Language:Japanese  

  • Topics from special edition 社会医学におけるAI研究

    内田 満夫, 野下 浩司, 渡辺 由佳子, 小山 洋

    細胞   2019.6

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    Language:Japanese  

  • 深層学習の利活用による植物表現型解析技術の展望

    大倉 史生, 野下 浩司, 木下 俊則, 戸田 陽介

    植物科学の最前線   2019.1

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    Language:Japanese  

    DOI: 10.24480/bsj-review.10b7.00160

  • 野外における作物の3次元形態の再構築 (特集 植物Phenotyping)

    野下 浩司

    アグリバイオ = Agricultural biotechnology   2018.3

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    Language:Japanese  

  • 野外における作物の3次元形態の再構築. in アグリバイオ

    野下 浩司

    2018.3

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    Language:Japanese  

  • 巻貝殻形態の理論形態学的解析パッケージ--Spiral Shell Form

    野下 浩司

    静岡大学地球科学研究報告   2010.7

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    Language:Japanese  

    DOI: 10.14945/00005294

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Works

  • ktch

    Noshita, K.

    2023.3

Professional Memberships

  • The Society for the Study of Evolution

  • PALAEONTOLOGICAL SOCIETY OF JAPAN

  • THE JAPANESE SOCIETY FOR MATHEMATICAL BIOLOGY

  • THE ECOLOGICAL SOCIETY OF JAPAN

  • JAPANESE SOCIETY OF BREEDING

  • SOCIETY OF EVOLUTIONARY STUDIES, JAPAN

  • JAPANESE SOCIETY OF AGRICULTURAL INFORMATICS

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Committee Memberships

  • Organizer   Domestic

    2023.4 - 2025.3   

  • 古生物学会   広報幹事   Domestic

    2023.4 - 2025.3   

  • Organizer   Domestic

    2021.1 - Present   

  • Organizer   Domestic

    2019.1 - Present   

Academic Activities

  • Screening of academic papers

    Role(s): Peer review

    2023

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    Type:Peer review 

    Number of peer-reviewed articles in foreign language journals:4

  • Screening of academic papers

    Role(s): Peer review

    2022

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    Type:Peer review 

    Number of peer-reviewed articles in foreign language journals:3

  • Screening of academic papers

    Role(s): Peer review

    2020

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    Type:Peer review 

    Number of peer-reviewed articles in foreign language journals:4

    Number of peer-reviewed articles in Japanese journals:1

  • Screening of academic papers

    Role(s): Peer review

    2019

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    Type:Peer review 

    Number of peer-reviewed articles in foreign language journals:7

Research Projects

  • マルチスケール計測・計算技術の融合による高スループットデバイス開発支援プラットフォーム

    2024 - 2028

    未来社会創造事業 「共通基盤領域」 本格研究

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    Authorship:Coinvestigator(s)  Grant type:Contract research

  • ヘパラン硫酸プロテオグリカンを標的とした、遺伝性脳小血管病の包括的治療方法の開発

    2024 - 2026

    日本医療研究開発機構 難治性疾患実用化研究事業

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    Authorship:Coinvestigator(s)  Grant type:Contract research

  • 感染症対策が駆動する新型コロナウイルスの進化予測とウィズコロナ

    Grant number:23H03497  2023 - 2025

    日本学術振興会  科学研究費助成事業  基盤研究(B)

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    Authorship:Coinvestigator(s)  Grant type:Scientific research funding

  • サイバーフィジカルシステムを利用した作物強靭化による食料リスクゼロの実現

    2022 - 2025

    生物系特定産業技術研究支援センター(BRAIN) ムーンショット型研究開発事業

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    Authorship:Coinvestigator(s)  Grant type:Contract research

  • 作物の水輸送効率の最適化に向けた根の通過細胞数の遺伝学的解析

    Grant number:22H02308  2022 - 2024

    日本学術振興会  科学研究費助成事業  基盤研究(B)

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    Authorship:Coinvestigator(s)  Grant type:Scientific research funding

  • 植物器官の周期的出現パタンとその変調による個体の「かたち」の多様性の統合的理解

    Grant number:22H04727  2022 - 2023

    日本学術振興会・文部科学省  科学研究費助成事業  新学術領域研究(研究領域提案型)

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    Authorship:Principal investigator  Grant type:Scientific research funding

  • 植物3次元形態の数理モデル化によるフェノタイピング基盤技術の開発

    Grant number:21K14947  2021 - 2023

    日本学術振興会  科学研究費助成事業  若手研究

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    Authorship:Principal investigator  Grant type:Scientific research funding

  • 大規模画像データに基づくゲノムと環境の相互作用を考慮した成長予測モデルの構築

    2021

    戦略的創造研究推進事業 (文部科学省)

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    Authorship:Coinvestigator(s)  Grant type:Contract research

  • 3次元形態計測と数理モデル化による植物フェノタイピングプラットフォームの高度化

    2021

    理研-九⼤ 科学技術ハブ共同研究 プログラム

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    Authorship:Principal investigator  Grant type:On-campus funds, funds, etc.

  • 複雑臓器制御系の数理的包括理解と超早期精密医療への挑戦

    2020 - 2025

    戦略的な研究開発の推進 ムーンショット型研究開発事業

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    Authorship:Coinvestigator(s)  Grant type:Contract research

  • シーボルト標本を用いた江戸の自然の科学的復元

    Grant number:20KK0011  2020 - 2023

    日本学術振興会  科学研究費助成事業  国際共同研究強化(B)

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    Authorship:Coinvestigator(s)  Grant type:Scientific research funding

  • 博物館資料の3D形態学:形状認識の定量化、高精度化、および展示公開への活用

    Grant number:20H01381  2020 - 2022

    日本学術振興会  科学研究費助成事業  基盤研究(B)

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    Authorship:Coinvestigator(s)  Grant type:Scientific research funding

  • 「かたち」に関する数理科学基盤の構築および諸分野への社会実装

    2020 - 2022

    科学技術振興機構 未来社会創造事業

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    Authorship:Principal investigator  Grant type:Contract research

  • マルチドローン画像を用いた4D空間マッピングによる植物計測法の開発

    2020

    戦略的創造研究推進事業 (文部科学省)

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    Authorship:Coinvestigator(s)  Grant type:Contract research

  • 三次元データベースと数理解析・モデル構築による分野統合的研究の促進

    Grant number:19H05738  2019 - 2023

    日本学術振興会・文部科学省  科学研究費助成事業  新学術領域研究(研究領域提案型)

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    Authorship:Coinvestigator(s)  Grant type:Scientific research funding

  • 作物3D形態ベンチマークデータセットの構築による植物フェノタイピング研究の加速

    Grant number:19K15946  2019 - 2020

    日本学術振興会  科学研究費助成事業  若手研究

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    Authorship:Principal investigator  Grant type:Scientific research funding

  • 植物3次元形態データセットの作成と全体構造を記述する特徴量の開発

    2019

    九州大学 数理・データサイエンスに関する教育・研究支援プログラム

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    Authorship:Principal investigator  Grant type:On-campus funds, funds, etc.

  • 貝殻らせん成長メカニズムの解明:進化発生古生物学創成に向けて

    Grant number:18H01323  2018 - 2022

    日本学術振興会  科学研究費助成事業  基盤研究(B)

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    Authorship:Coinvestigator(s)  Grant type:Scientific research funding

  • Systems Bone Biology~骨・軟骨疾患の発症予測から疾患予防へ

    Grant number:18KT0018  2018 - 2020

    日本学術振興会  科学研究費助成事業  基盤研究(B)

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    Authorship:Coinvestigator(s)  Grant type:Scientific research funding

  • マルチスケールデータ融合による草姿・草型の超解像フェノタイピング技術の開発

    2016 - 2019

    戦略的創造研究推進事業 (文部科学省)

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    Authorship:Principal investigator  Grant type:Contract research

  • 形態の適応と形成過程の数理的研究

    Grant number:12J00760  2012 - 2014

    日本学術振興会  科学研究費助成事業  特別研究員奨励費

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    Authorship:Principal investigator  Grant type:Scientific research funding

  • 形態の適応と形成過程の数理的研究

    2012 - 2014

    日本学術振興会  特別研究員

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    Authorship:Principal investigator  Grant type:Joint research

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Educational Activities

  • Computer Simulation Exercises for Biology, Biological Sciences Advanced Course 1, Synthetic Laboratory Experiments in Natural Science Basic Course, Population Ecology, Mathematical Biology, Introduction to Interdisciplinary Mathematics 1, Basic Science Experiments, Natural Science Experiments

Class subject

  • 数理生物学

    2024.4 - 2024.9   First semester

  • 数理生物学演習

    2024.4 - 2024.9   First semester

  • 数学共創概論Ⅰ

    2024.4 - 2024.9   First semester

  • 自然科学総合実験

    2024.4 - 2024.6   Spring quarter

  • 数学共創モデリング

    2023.4 - 2024.3   Full year

  • 数理生物学演習

    2023.4 - 2023.9   First semester

  • 数理生物学

    2023.4 - 2023.9   First semester

  • 数学共創概論Ⅰ

    2023.4 - 2023.9   First semester

  • 数理生物学演習

    2022.4 - 2022.9   First semester

  • 数理生物学

    2022.4 - 2022.9   First semester

  • 数学共創概論Ⅰ

    2022.4 - 2022.9   First semester

  • 数理生物学演習

    2021.4 - 2021.9   First semester

  • 数理生物学

    2021.4 - 2021.9   First semester

  • 数学共創概論Ⅰ

    2021.4 - 2021.9   First semester

  • 集団生物学

    2020.10 - 2021.3   Second semester

  • 数理生物学演習

    2020.4 - 2020.9   First semester

  • 自然科学総合実験(基礎)

    2019.10 - 2020.3   Second semester

  • 数理生物学演習

    2019.4 - 2019.9   First semester

  • 生命理学特論I

    2018.10 - 2019.3   Second semester

  • 数理生物学演習

    2018.4 - 2018.9   First semester

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FD Participation

  • 2023.3   Role:Participation   Title:【生物学科】大学発明の出願・権利化に関するFD

    Organizer:Undergraduate school department

  • 2019.10   Role:Participation   Title:科研費改革後の学術研究動向について

    Organizer:Undergraduate school department

Visiting, concurrent, or part-time lecturers at other universities, institutions, etc.

  • 2024  名古屋大学 生命理学専攻 異分野融合生物学講座 招へい教員 

  • 2024  奈良文化財研究所 埋蔵文化財センター 遺跡・調査技術研究室 客員研究員  Domestic/International Classification:Japan 

  • 2023  奈良文化財研究所 埋蔵文化財センター 遺跡・調査技術研究室 客員研究員  Domestic/International Classification:Japan 

  • 2023  名古屋大学 生命理学専攻 異分野融合生物学講座 招へい教員  Domestic/International Classification:Japan 

  • 2022  名古屋大学 生命理学専攻 異分野融合生物学講座 招へい教員  Domestic/International Classification:Japan 

  • 2022  奈良文化財研究所 埋蔵文化財センター 遺跡・調査技術研究室 客員研究員  Domestic/International Classification:Japan 

  • 2021  名古屋大学 生命理学専攻 異分野融合生物学講座 招へい教員  Domestic/International Classification:Japan 

  • 2021  奈良文化財研究所 埋蔵文化財センター 遺跡・調査技術研究室 客員研究員  Domestic/International Classification:Japan 

    Semester, Day Time or Duration:令和3(2021)年9月 -

  • 2018  Computational Plant Science Lab, UGA  Classification:Affiliate faculty  Domestic/International Classification:Overseas 

    Semester, Day Time or Duration:2018年 9月17日 - 2018年 12月11日

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Social Activities

  • スマート農業指導者養成研修

    愛知県農業試験場  2023.11

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    Audience: General, Scientific, Company, Civic organization, Governmental agency

    Type:Seminar, workshop

  • 「貝の不思議」展

    東京大学総合研究博物館  文京区教育センター 2階 大学連携事業室  2021.5

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    Audience: General, Scientific, Company, Civic organization, Governmental agency

    Type:Other

  • ボトルビルダーズ――古代アンデス、壺中のラビリンス

    東京大学総合研究博物館  東京大学総合研究博物館小石川分館/建築ミュージアム  2020.9

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    Audience: General, Scientific, Company, Civic organization, Governmental agency

    Type:Other

  • Plant Phenotyping x Engineeringアイデアソン

    国際農研,日本植物フェノタイピングネットワーク  国際農林水産業研究センター  2019.8

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    Audience: General, Scientific, Company, Civic organization, Governmental agency

    Type:Seminar, workshop

  • 植物3次元形態の取得から定量化へ:写真測量技術と点群解析 in JST/CREST Phenomics講習会「はじめてみよう・植物デジタル形質評価」

    2019.1

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    Audience: General, Scientific, Company, Civic organization, Governmental agency

    Type:Seminar, workshop

  • 貝殻形態の多様性を数理モデルで解明する in 第33回 metaPhorestセミナー AKI INOMATAx野下浩司 貝のカタチ

    2018.5

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    Audience: General, Scientific, Company, Civic organization, Governmental agency

    Type:Seminar, workshop

  • ダイズ群落の3D計測への取り組み in 公開セミナー 基礎研究で未来の『食と農業』を切り拓く

    CREST「農業ビッグデータ」  十勝さらべつ熱中小学校,北海道  2017.8

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    Audience: General, Scientific, Company, Civic organization, Governmental agency

    Type:Lecture

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Travel Abroad

  • 2018.9 - 2018.12

    Staying countory name 1:United States   Staying institution name 1:University of Georgia

  • 2014.4 - 2014.11

    Staying countory name 1:United States   Staying institution name 1:University of Pennsylvania