トピックス賞

2015.3   日本農芸化学会   Asian Microbiome Project phase 2: アジア人の腸内細菌叢の加齢に伴う変化

森永賞

2008.6   森永奉仕会   乳児アレルギー早期予知のための腸内フローラ解析技術の開拓

ポスター賞

2005.8   アメリカ微生物学会   Screening for quorum sensing inhibitors targeting fsr regulatory system

論文賞

2004.10   日本生物工学会   Effect of Heterologous Expression of Molecular Chaperone DnaK from Tetragenococcus halophilus on Salinity Adaptation of Escherichia coli

農芸化学奨励賞

1999.4   日本農芸化学会   腸球菌の生フェロモンシグナリングに関する生物有機化学的・分子生物学的研究

Dense tracking of the dynamics of the microbial community and chemicals constituents in spontaneous wheat sourdough during two months of backslopping. Reviewed

Mugihito Oshiro, Rie Momoda, Masaru Tanaka, Takeshi Zendo, Jiro Nakayama

Journal of bioscience and bioengineering   128 ( 2 )   170 - 176   2019.8

Urban Diets Linked to Gut Microbiome and Metabolome Alterations in Children: A Comparative Cross-sectional Study in Thailand Reviewed International journal

Juma M. Kisuse, Orawan La-ongkham, Massalin Nakphaichit, Phatthanaphong Therdtatha, Rie Momoda, Masaru Tanaka, Shinji Fukuda, Siam Popluechai, Kongkiat Kespechara, Kenji Sonomoto, Yuan-Kun Lee, Sunee Nitisinprasert and Jiro Nakayama

Front. Microbiol.   2018.8

Gut dysbiosis associated with hepatitis C virus infection Reviewed International journal

Inoue T, Nakayama J, Moriya K, Kawaratani H, Momoda R, Ito K, Iio E, Nojiri S, Fujiwara K, Yoneda M, Yoshiji H, Tanaka Y

Clin Infect Dis   67 ( 6 )   869 - 877   2018.5

Metabolic dependent and independent pH-drop shuts down VirSR quorum sensing in Clostridium perfringens. Reviewed

Keika Adachi, Kaori Ohtani, Michio Kawano, Ravindra Pal Singh, Basit Yousuf, Kenji Sonomoto, Tohru Shimizu, Jiro Nakayama

Journal of bioscience and bioengineering   125 ( 5 )   525 - 531   2018.5

Development of the gut microbiota in infancy and its impact on health in later life. Invited Reviewed International journal

Masaru Tanaka, Jiro Nakayama

Allergology international : official journal of the Japanese Society of Allergology   66 ( 4 )   515 - 522   2017.10

Signatures in the gut microbiota of Japanese infants who developed food allergies in early childhood. Reviewed International journal

Masaru Tanaka, Yuki Korenori, Masakazu Washio, Takako Kobayashi, Rie Momoda, Chikako Kiyohara, Aki Kuroda, Yuka Saito, Kenji Sonomoto, Jiro Nakayama

FEMS microbiology ecology   93 ( 8 )   1 - 11   2017.8

Impact of westernized diet on gut microbiota in children on Leyte island Reviewed

Jiro Nakayama, Azusa Yamamoto, Ladie A. Palermo-Conde, Kanako Higashi, Kenji Sonomoto, Julie Tan, Yuan Kun Lee

Frontiers in Microbiology   8 ( FEB )   2017.2

Fermented papaya preparation restores age- related reductions in peripheral blood mononuclear cell cytolytic activity in tube- fed patients Reviewed

Yuhzo Fujita, Haruo Tsuno, Jiro Nakayama

PLoS One   12 ( 1 )   2017.1

Microbial Community of Healthy Thai Vegetarians and Non-Vegetarians, Their Core Gut Microbiota, and Pathogen Risk. Reviewed International journal

Supatjaree Ruengsomwong, Orawan La-Ongkham, Jiahui Jiang, Bhusita Wannissorn, Jiro Nakayama, Sunee Nitisinprasert

Journal of microbiology and biotechnology   26 ( 10 )   1723 - 1735   2016.10

Avellanin C, an inhibitor of quorum-sensing signaling in Staphylococcus aureus, from Hamigera ingelheimensis. Reviewed

Yasuhiro Igarashi, Fumiya Gohda, Taito Kadoshima, Takao Fukuda, Tomoaki Hanafusa, Akane Shojima, Jiro Nakayama, Gerald F Bills, Stephen Peterson

The Journal of antibiotics   68 ( 11 )   707 - 710   2015.11

Diversity in gut bacterial community of school-age children in Asia. Reviewed International journal

Jiro Nakayama, Koichi Watanabe, Jiahui Jiang, Kazunori Matsuda, Shiou-Huei Chao, Pri Haryono, Orawan La-Ongkham, Martinus-Agus Sarwoko, I Nengah Sujaya, Liang Zhao, Kang-Ting Chen, Yen-Po Chen, Hsueh-Hui Chiu, Tomoko Hidaka, Ning-Xin Huang, Chikako Kiyohara, Takashi Kurakawa, Naoshige Sakamoto, Kenji Sonomoto, Kousuke Tashiro, Hirokazu Tsuji, Ming-Ju Chen, Vichai Leelavatcharamas, Chii-Cherng Liao, Sunee Nitisinprasert, Endang S Rahayu, Fa-Zheng Ren, Ying-Chieh Tsai, Yuan-Kun Lee

Scientific reports   5   8397 - 8397   2015.2

Cyclodepsipeptides produced by actinomycetes inhibit cyclic-peptide-mediated quorum sensing in Gram-positive bacteria Reviewed

Said E. Desouky, Akane Shojima, Ravindra Pal Singh, Takahisa Matsufuji, Yasuhiro Igarashi, Takashi Suzuki, Tohru Yamagaki, Ken Ichi Okubo, Kaori Ohtani, Kenji Sonomoto, Jiro Nakayama

FEMS Microbiology Letters   362 ( 14 )   2015.1

Rationale design of quorum-quenching peptides that target the VirSR system of Clostridium perfringens Reviewed

Ravindra Pal Singh, Ken Ichi Okubo, Kaori Ohtani, Keika Adachi, Kenji Sonomoto, Jiro Nakayama

FEMS Microbiology Letters   362 ( 22 )   2015.1

Monitoring of the microbiota profile in nukadoko, a naturally fermented rice bran bed for pickling vegetables Reviewed

Hiroshi Ono, Shoko Nishio, Jun Tsurii, Tetsuhiro Kawamoto, Kenji Sonomoto, Jiro Nakayama

Journal of Bioscience and Bioengineering   118 ( 5 )   520 - 525   2014.1

Quorum sensing in gram-positive bacteria Assay protocols for staphylococcal agr and enterococcal fsr systems Reviewed

Akane Shojima, Jiro Nakayama

Methods in Molecular Biology   1147   33 - 41   2014.1

High-throughput screening of inhibitors targeting Agr/Fsr quorum sensing in staphylococcus aureus and enterococcus faecalis Reviewed

Said E. Desouky, Kenzo Nishiguchi, Takeshi Zendo, Yasuhiro Igarashi, Paul Williams, Kenji Sonomoto, Jiro Nakayama

Bioscience, Biotechnology and Biochemistry   77 ( 5 )   923 - 927   2013.6

Development of a peptide antagonist against fsr quorum sensing of Enterococcus faecalis. Reviewed International journal

Jiro Nakayama, Ryoji Yokohata, Mami Sato, Takashi Suzuki, Takahisa Matsufuji, Kenzo Nishiguchi, Takeshi Kawai, Yosuke Yamanaka, Koji Nagata, Masaru Tanokura, Kenji Sonomoto

ACS chemical biology   8 ( 4 )   804 - 811   2013.4

Aberrant structures of fecal bacterial community in allergic infants profiled by 16S rRNA gene pyrosequencing. Reviewed International journal

Jiro Nakayama, Takako Kobayashi, Shigemitsu Tanaka, Yuki Korenori, Atsushi Tateyama, Naoshige Sakamoto, Chikako Kiyohara, Taro Shirakawa, Kenji Sonomoto

FEMS immunology and medical microbiology   63 ( 3 )   397 - 406   2011.12

16S rRNA pyrosequencing-based investigation of the bacterial community in nukadoko, a pickling bed of fermented rice bran. Reviewed International journal

Naoshige Sakamoto, Shigemitsu Tanaka, Kenji Sonomoto, Jiro Nakayama

International journal of food microbiology   144 ( 3 )   352 - 359   2011.1

Ambuic acid inhibits the biosynthesis of cyclic peptide quormones in gram-positive bacteria. Reviewed International journal

Jiro Nakayama, Yumi Uemura, Kenzo Nishiguchi, Norito Yoshimura, Yasuhiro Igarashi, Kenji Sonomoto

Antimicrobial agents and chemotherapy   53 ( 2 )   580 - 586   2009.2

Structure-activity relationship of gelatinase biosynthesis-activating pheromone of Enterococcus faecalis. Reviewed International journal

Kenzo Nishiguchi, Koji Nagata, Masaru Tanokura, Kenji Sonomoto, Jiro Nakayama

Journal of bacteriology   191 ( 2 )   641 - 650   2009.1

Two homologous agr-like quorum-sensing systems cooperatively control adherence, cell morphology, and cell viability properties in Lactobacillus plantarum WCFS1 Reviewed

Toshio Fujii, Colin Ingham, Jiro Nakayama, Marke Beerthuyzen, Ryoko Kunuki, Douwe Molenaar, Mark Sturme, Elaine Vaughan, Michiel Kleerebezem, Willem De Vos

Journal of Bacteriology   190 ( 23 )   7655 - 7665   2008.12

Molecular monitoring of bacterial community structure in long-aged nukadoko: pickling bed of fermented rice bran dominated by slow-growing lactobacilli. Reviewed

Jiro Nakayama, Hiroyuki Hoshiko, Mizuki Fukuda, Hidetoshi Tanaka, Naoshige Sakamoto, Shigemitsu Tanaka, Kazutoshi Ohue, Kenji Sakai, Kenji Sonomoto

Journal of bioscience and bioengineering   104 ( 6 )   481 - 489   2007.12

Differences in developing intestinal microbiota between allergic and non-allergic infants A pilot study in Japan Reviewed

Prapa Songjinda, Jiro Nakayama, Atsushi Tateyama, Shigemitsu Tanaka, Mina Tsubouchi, Chikako Kiyohara, Taro Shirakawa, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   71 ( 9 )   2338 - 2342   2007.11

Siamycin attenuates fsr quorum sensing mediated by a gelatinase biosynthesis-activating pheromone in Enterococcus faecalis. Reviewed International journal

Jiro Nakayama, Emi Tanaka, Reiko Kariyama, Koji Nagata, Kenzo Nishiguchi, Ritsuko Mitsuhata, Yumi Uemura, Masaru Tanokura, Hiromi Kumon, Kenji Sonomoto

Journal of bacteriology   189 ( 4 )   1358 - 1365   2007.2

Revised model for Enterococcus faecalis fsr quorum-sensing system: the small open reading frame fsrD encodes the gelatinase biosynthesis-activating pheromone propeptide corresponding to staphylococcal agrd. Reviewed International journal

Jiro Nakayama, Shengmin Chen, Nozomi Oyama, Kenzo Nishiguchi, Essam A Azab, Emi Tanaka, Reiko Kariyama, Kenji Sonomoto

Journal of bacteriology   188 ( 23 )   8321 - 8326   2006.12

An agr-like two-component regulatory system in Lactobacillus plantarum is involved in production of a novel cyclic peptide and regulation of adherence. International journal

Mark H J Sturme, Jiro Nakayama, Douwe Molenaar, Yoshiko Murakami, Ryoko Kunugi, Toshio Fujii, Elaine E Vaughan, Michiel Kleerebezem, Willem M de Vos

Journal of bacteriology   187 ( 15 )   5224 - 5235   2005.8

Molecular monitoring of the developmental bacterial community in the gastrointestinal tract of Japanese infants Reviewed

Prapa Songjinda, Jiro Nakayama, Yumiko Kuroki, Shigemitsu Tanaka, Sanae Fukuda, Chikako Kiyohara, Tetsuro Yamamoto, Kunio Izuchi, Taro Shirakawa, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   69 ( 3 )   638 - 641   2005.3

High-throughput PCR screening of genes for three-component regulatory system putatively involved in quorum sensing from low-G + C gram-positive bacteria. International journal

Jiro Nakayama, Antoon D L Akkermans, Willem M De Vos

Bioscience, biotechnology, and biochemistry   67 ( 3 )   480 - 489   2003.3

Description of a 23.9-kilobase chromosomal deletion containing a region encoding fsr genes which mainly determines the gelatinase-negative phenotype of clinical isolates of Enterococcus faecalis in urine. International journal

Jiro Nakayama, Reiko Kariyama, Hiromi Kumon

Applied and environmental microbiology   68 ( 6 )   3152 - 3155   2002.6

Functional analysis of TraA, the sex pheromone receptor encoded by pPD1, in a promoter region essential for the mating response in Enterococcus faecalis Reviewed

Takaaki Horii, Hiromichi Nagasawa, Jiro Nakayama

Journal of Bacteriology   184 ( 22 )   6343 - 6350   2002.1

Chemical synthesis and biological activity of the gelatinase biosynthesis-activating pheromone of enterococcus faecalis and its analogs

Jiro Nakayama, Yong Cao, Takaaki Horii, Shohei Sakuda, Hiromichi Nagasawa

Bioscience, Biotechnology and Biochemistry   65 ( 10 )   2322 - 2325   2001.10

Gelatinase biosynthesis-activating pheromone: a peptide lactone that mediates a quorum sensing in Enterococcus faecalis Reviewed

Jiro Nakayama, Yong Cao, Takaaki Horii, Shohei Sakuda, Antoon D L Akkermans, Willem M. De Vos, Hiromichi Nagasawa

Molecular Microbiology   41 ( 1 )   145 - 154   2001.1

Analysis of pheromone binding and pheromone reception by Enterococcus faecalis Reviewed

Jiro Nakayama, Yuuichiro Takanami, Akinori Suzuki

Advances in Experimental Medicine and Biology   418   1033 - 1035   1997.10

Targeted disruption of the PD78 gene (traF) reduces pheromone-inducible conjugal transfer of the bacteriocin plasmid pPD1 in Enterococcus faecalis Reviewed

Jiro Nakayama, Don B. Clewell, Akinori Suzuki

FEMS Microbiology Letters   128 ( 3 )   283 - 288   1995.5

Cloning and characterization of a region of Enterococcus faecalis plasmid pPD1 encoding pheromone inhibitor (ipd), pheromone sensitivity (traC), and pheromone shutdown (traB) genes Reviewed

Jiro Nakayama, K. Yoshida, H. Kobayashi, A. Isogai, D. B. Clewell, A. Suzuki

Journal of Bacteriology   177 ( 19 )   5567 - 5573   1995.1

Isolation and Structure of the Sex Pheromone Inhibitor, iAM373, of Enterococcus faecalis Reviewed

Jiro Nakayama, Yukitsugu Ono, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   59 ( 7 )   1358 - 1359   1995.1

Isolation and Structure of the Enterococcus faecalis Sex Pheromone, cOB1, that Induces Conjugal Transfer of the Hemolysin/Bacteriocin Plasmids, pOB1 and pYI1 Reviewed

Jiro Nakayama, Yuki Abe, Yukitsugu Ono, Akira Isogai, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   59 ( 4 )   703 - 705   1995.1

The prgQ gene of the Enterococcus faecalis tetracycline resistance plasmid pCF10 encodes a peptide inhibitor, iCF10 Reviewed

Jiro Nakayama, R. E. Ruhfel, G. M. Dunny, A. Isogai, A. Suzuki

Journal of Bacteriology   176 ( 23 )   7405 - 7408   1994.1

C-Terminal Identification of AD74, a Proteolytic Product of Enterococcus faecalis Aggregation Substance Application of Liquid Chromatography/Mass Spectrometry Reviewed

Jiro Nakayama, Hiroshi Watarai, Akira Isogai, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   56 ( 1 )   127 - 131   1992.1

Immunological Characterization of Pheromone-induced Proteins Associated with Sexual Aggregation in Enterococcus faecalis Reviewed

Jiro Nakayama, Hiroshi Watarai, Akira Isogai, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   56 ( 2 )   264 - 269   1992.1

Nucleotide sequence of the sex pheromone inhibitor (iAD1) determinant ofEnterococcus faecalis conjugative plasmid pAD1 Reviewed

Don B. Clewell, Linda T. Pontius, Florence Y. An, Yasuyoshi Ike, Akinori Suzuki, Jiro Nakayama

Plasmid   24 ( 2 )   156 - 161   1990.9

Efficient extracellular expression of a foreign protein in smptomyos using secretory protease inhibitor (SSI) gene fusions Reviewed

Seiichi Taguchit, Izumi Kumagai, Jiro Nakayama, Akinori Suzuki, Kin Ichiro Miura

Nature Biotechnology   7 ( 10 )   1063 - 1066   1989.10

Isolation and Structural Elucidation of a New Cyclitol Derivative, Streptol, as a Plant Growth Regulator Reviewed

Akira Isogai, Shouhei Sakuda, Jiro Nakayama, Satoshi Watanabe, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   51 ( 8 )   2277 - 2279   1987.1

Probiotic Chocolate Containing <i>Lactobacillus plantarum</i> Dad-13 Alters the Gut Microbiota Composition of Undernourished Children in Lombok: A Randomized Double-Blind Trial

Rahayu, ES; Yoga, WK; Komalasari, H; Mariyatun, M; Yuda, WA; Manurung, NEP; Hasan, PN; Suharman, S; Pamungkaningtyas, FH; Nurfiana, DA; Pramesi, PC; Gatya, M; Therdtatha, P; Nakayama, J; Juffrie, M; Djaafar, TF; Marwati, T; Utami, T

INTERNATIONAL JOURNAL OF FOOD SCIENCE   2024   9493797   2024.8   （ ISSN:2356-7015 eISSN:2314-5765 ）

Gut microbiome signatures associated with type 2 diabetes in obesity in Mongolia

Shinoda, A; Lkhagvajav, T; Mishima, R; Therdtatha, P; Jamiyan, D; Purevdorj, C; Sonomtseren, S; Chimeddorj, B; Namdag, B; Lee, YK; Demberel, S; Nakayama, J

FRONTIERS IN MICROBIOLOGY   15   1355396   2024.6   （ ISSN:1664-302X eISSN:1664-302X ）

アカラシアにおけるTh17免疫反応と関連した食道細菌叢の変化とLC20不全リン酸化の相互作用(The interplay between alterations in esophageal microbiota associated with Th17 immune response and impaired LC20 phosphorylation in achalasia)

Ikeda Hiroko, Ihara Eikichi, Takeya Kosuke, Mukai Koji, Onimaru Manabu, Ouchida Kenoki, Hata Yoshitaka, Bai Xiaopeng, Tanaka Yoshimasa, Sasaki Taisuke, Saito Fumiyo, Eto Masumi, Nakayama Jiro, Oda Yoshinao, Nakamura Masafumi, Inoue Haruhiro, Ogawa Yoshihiro

Journal of Gastroenterology   59 ( 5 )   361 - 375   2024.5   （ ISSN:0944-1174 ）

The interplay between alterations in esophageal microbiota associated with Th17 immune response and impaired LC20 phosphorylation in achalasia.

Hiroko Ikeda, Eikichi Ihara, Kosuke Takeya, Koji Mukai, Manabu Onimaru, Kenoki Ouchida, Yoshitaka Hata, Xiaopeng Bai, Yoshimasa Tanaka, Taisuke Sasaki, Fumiyo Saito, Masumi Eto, Jiro Nakayama, Yoshinao Oda, Masafumi Nakamura, Haruhiro Inoue, Yoshihiro Ogawa

Journal of gastroenterology   59 ( 5 )   361 - 375   2024.3   （ ISSN:0944-1174 eISSN:1435-5922 ）

Ziziphus spina-christi (L.) Willd. Leaves Extract Affecting agr Quorum Sensing System in Staphylococcus aureus

Refai, MY; Elazzazy, AM; Abu-Elghait, M; Desouky, S; Albureikan, MOI; Nakayama, J

ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING   49 ( 1 )   97 - 105   2024.1   （ ISSN:2193-567X eISSN:2191-4281 ）

Impact of vegetables on the microbiota of the rice bran pickling bed Nukadoko

SUGIURA Shunsaku, IKEDA Mika, NAKAMURA Yuichi, MISHIMA Riko, MORISHITA Mika, NAKAYAMA Jiro

Bioscience of Microbiota, Food and Health   advpub ( 0 )   2024   （ eISSN:21863342 ）

Effect of lactic acid bacterial starter KUB-G2 on grass silage quality and its microbial community performed using 140-ton plastic bag silos: a large-scale study

Therdtatha, P; La-Ongkham, O; Nakphaichit, M; Mapato, C; Rungruang, S; Nakayama, J; Nitisinprasert, S

QUALITY ASSURANCE AND SAFETY OF CROPS & FOODS   15   1 - 13   2024   （ ISSN:1757-8361 eISSN:1757-837X ）

Cyclic pairwise interaction representing a rock-paper-scissors game maintains the population of the vulnerable yeast Saccharomyces cerevisiae within a multispecies sourdough microbiome. International journal

Mugihito Oshiro, Takeshi Zendo, Yukihiro Tashiro, Jiro Nakayama

Microbiology spectrum   11 ( 6 )   e0137023   2023.12   （ ISSN:2165-0497 ）

Interception of Epoxide ring to quorum sensing system in Enterococcus faecalis and Staphylococcus aureus. International journal

Mohammed Y Refai, Ahmed M Elazzazy, Said E Desouky, Mohammed Abu-Elghait, Eman A Fayed, Sulaiman M Alajel, Abdullah A Alajlan, Mona O Albureikan, Jiro Nakayama

AMB Express   13 ( 1 )   126 - 126   2023.11   （ ISSN:2191-0855 ）

Interaction of diet and gut microbiome in Asians and its effect on their health

Nakayama, J; Mishima, R; Shinoda, A; Rahayu, ES; Nakphaichit, M; Demberel, S; Dalmacio, LM; Lee, YK

ANNALS OF NUTRITION AND METABOLISM   79   135 - 135   2023.8   （ ISSN:0250-6807 eISSN:1421-9697 ）

Longitudinal gut mycobiota changes in Japanese infants during first three years of life.

Riko Mishima, Masaru Tanaka, Rie Momoda, Masafumi Sanefuji, Seiichi Morokuma, Masanobu Ogawa, Kiyoko Kato, Jiro Nakayama

Journal of bioscience and bioengineering   135 ( 4 )   266 - 273   2023.4   （ ISSN:1389-1723 eISSN:1347-4421 ）

生後3年間の日本人乳児における長期的腸内真菌叢の変化(Longitudinal gut mycobiota changes in Japanese infants during first three years of life)

Mishima Riko, Tanaka Masaru, Momoda Rie, Sanefuji Masafumi, Morokuma Seiichi, Ogawa Masanobu, Kato Kiyoko, Nakayama Jiro

Journal of Bioscience and Bioengineering   135 ( 4 )   266 - 273   2023.4   （ ISSN:1389-1723 ）

修士学生に就活フリーの時間を

中山 二郎

化学と生物   61 ( 3 )   103 - 103   2023.3   （ ISSN:0453073X eISSN:18836852 ）

変わりゆくアジア食とアジア人の腸内細菌叢

中山 二郎

Microbiome Science   2   6 - 12   2023

各種胆汁酸分子の発芽誘導能を用いた難培養性腸内細菌の分離と日本人腸内細菌叢カクテルの創製

中山 二郎

発酵研究所助成研究報告集   37 ( 0 )   128   2023   （ ISSN:00738751 eISSN:27592553 ）

DYSBIOSIS IN CHRONIC HEPATITIS C WORSENS WITH AGING

Inoue, T; Nakayama, J; Moriya, K; Kawaratani, H; Iio, E; Matsuura, K; Watanabe, T; Nagaoka, K; Tateyama, M; Setoyama, H; Yoshimaru, Y; Yoshiji, H; Tanaka, Y

HEPATOLOGY   76   S1293 - S1294   2022.10   （ ISSN:0270-9139 eISSN:1527-3350 ）

Pathobiont-responsive Th17 cells in gut-mouth axis provoke inflammatory oral disease and are modulated by intestinal microbiome. International journal

Jun-Ichi Nagao, Sari Kishikawa, Honami Tanaka, Kenji Toyonaga, Yuka Narita, Kanae Negoro-Yasumatsu, Sonoko Tasaki, Ken-Ichi Arita-Morioka, Jiro Nakayama, Yoshihiko Tanaka

Cell reports   40 ( 10 )   111314 - 111314   2022.9   （ ISSN:2211-1247 ）

The association between early formula and reduced risk of cow's milk allergy during the first three year of life: a Japanese cohort study. International journal

Kota Ikari, Junichiro Tezuka, Masafumi Sanefuji, Jiro Nakayama, Daisuke Nishima, Yuri Sonoda, Masanobu Ogawa, Masayuki Shimono, Reiko Suga, Satoshi Honjo, Koichi Kusuhara, Shouichi Ohga

Allergy, asthma, and clinical immunology : official journal of the Canadian Society of Allergy and Clinical Immunology   18 ( 1 )   71 - 71   2022.8   （ ISSN:1710-1492 ）

Glucosylceramide Changes Bacterial Metabolism and Increases Gram-Positive Bacteria through Tolerance to Secondary Bile Acids In Vitro. Reviewed International journal

Huanghuang Dai, Akira Otsuka, Kurumi Tanabe, Teruyoshi Yanagita, Jiro Nakayama, Hiroshi Kitagaki

International journal of molecular sciences   23 ( 10 )   2022.5   （ ISSN:16616596 eISSN:1422-0067 ）

Characterization and Demonstration of Mock Communities as Control Reagents for Accurate Human Microbiome Community Measurements. Reviewed International journal

Dieter M Tourlousse, Koji Narita, Takamasa Miura, Akiko Ohashi, Masami Matsuda, Yoshifumi Ohyama, Mamiko Shimamura, Masataka Furukawa, Ken Kasahara, Keishi Kameyama, Sakae Saito, Maki Goto, Ritsuko Shimizu, Riko Mishima, Jiro Nakayama, Koji Hosomi, Jun Kunisawa, Jun Terauchi, Yuji Sekiguchi, Hiroko Kawasaki

Microbiology spectrum   10 ( 2 )   e0191521   2022.4

Characterization and Demonstration of Mock Communities as Control Reagents for Accurate Human Microbiome Community Measurements

Tourlousse, DM; Narita, K; Miura, T; Ohashi, A; Matsuda, M; Ohyama, Y; Shimamura, M; Furukawa, M; Kasahara, K; Kameyama, K; Saito, S; Goto, M; Shimizu, R; Mishima, R; Nakayama, J; Hosomi, K; Kunisawa, J; Terauchi, J; Sekiguchi, Y; Kawasaki, H

MICROBIOLOGY SPECTRUM   10 ( 2 )   2022.4   （ ISSN:2165-0497 ）

Secondary Metabolites of Actinomycetales as Potent Quorum Sensing Inhibitors Targeting Gram-Positive Pathogens: In Vitro and In Silico Study. Reviewed International journal

Said E Desouky, Mohammed Abu-Elghait, Eman A Fayed, Samy Selim, Basit Yousuf, Yasuhiro Igarashi, Basel A Abdel-Wahab, Amnah Mohammed Alsuhaibani, Kenji Sonomoto, Jiro Nakayama

Metabolites   12 ( 3 )   2022.3   （ ISSN:2218-1989 eISSN:2218-1989 ）

“胆汁酸”を介した腸内細菌と宿主のクロストーク

田中 優, 中山 二郎

化学と生物   60 ( 2 )   79 - 88   2022.2   （ ISSN:0453073X eISSN:18836852 ）

Gut microbiome profiles in Thai healthy pregnant women and its association with types of foods

Phoonlapdacha, P; Tangshewinsirikul, C; Phosuwattanakul, J; Kittisakmontri, K; Nitisinprasert, S; Nakayama, J; Prombutara, P; Suthutvoravut, U; Chongviriyaphan, N

BMC PREGNANCY AND CHILDBIRTH   22 ( 1 )   79   2022.1   （ eISSN:1471-2393 ）

Bile acid dysmetabolism in the gut-microbiota-liver axis under hepatitis C virus infection. Reviewed International journal

Takako Inoue, Yui Funatsu, Masaya Ohnishi, Masanori Isogawa, Keigo Kawashima, Masaru Tanaka, Kei Moriya, Hideto Kawaratani, Rie Momoda, Etsuko Iio, Hidewaki Nakagawa, Yutaka Suzuki, Kentaro Matsuura, Kei Fujiwara, Atsushi Nakajima, Hitoshi Yoshiji, Jiro Nakayama, Yasuhito Tanaka

Liver international : official journal of the International Association for the Study of the Liver   42 ( 1 )   124 - 134   2022.1   （ ISSN:1478-3223 eISSN:1478-3231 ）

Crisis of the Asian gut: associations among diet, microbiota, and metabolic diseases

THERDTATHA Phatthanaphong, SHINODA Akari, NAKAYAMA Jiro

Bioscience of Microbiota, Food and Health   41 ( 3 )   83 - 93   2022   （ ISSN:2186-6953 eISSN:21863342 ）

Characterization of the Biosynthetic Gene Cluster of Enterocin F4-9, a Glycosylated Bacteriocin. Reviewed International journal

Mohamed Abdelfattah Maky, Naoki Ishibashi, Jiro Nakayama, Takeshi Zendo

Microorganisms   9 ( 11 )   2021.11

Mechanistic Insight into Yeast Bloom in a Lactic Acid Bacteria Relaying-Community in the Start of Sourdough Microbiota Evolution. Reviewed International journal

Mugihito Oshiro, Masaru Tanaka, Rie Momoda, Takeshi Zendo, Jiro Nakayama

Microbiology spectrum   9 ( 2 )   e0066221   2021.10

Cultivation of Spore-Forming Gut Microbes Using a Combination of Bile Acids and Amino Acids. Reviewed International journal

Sakura Onizuka, Masaru Tanaka, Riko Mishima, Jiro Nakayama

Microorganisms   9 ( 8 )   2021.8

Mucosa-associated gut microbiota reflects clinical course of ulcerative colitis. Reviewed International journal

Yuichiro Nishihara, Haruei Ogino, Masaru Tanaka, Eikichi Ihara, Keita Fukaura, Kei Nishioka, Takatoshi Chinen, Yoshimasa Tanaka, Jiro Nakayama, Dongchon Kang, Yoshihiro Ogawa

Scientific reports   11 ( 1 )   13743 - 13743   2021.7

Diversity and dynamics of sourdough lactic acid bacteriota created by a slow food fermentation system. Reviewed

Mugihito Oshiro, Takeshi Zendo, Jiro Nakayama

Journal of bioscience and bioengineering   131 ( 4 )   333 - 340   2021.4

Molecular characterization of the possible regulation of multiple bacteriocin production through a three-component regulatory system in Enterococcus faecium NKR-5-3 Reviewed International journal

Naoki Ishibashi, Naho Matsumoto, Rodney Honrada Perez, Shun Iwatani, Haruki Sugino, Takeshi Zendo, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Journal of Bioscience and Bioengineering   131 ( 2 )   131 - 138   2021.2

The salivary microbiota of Thai adults with metabolic disorders and association with diet. Reviewed International journal

Tawatchai Chumponsuk, Lucsame Gruneck, Eleni Gentekaki, Paiboon Jitprasertwong, Niwed Kullawong, Jiro Nakayama, Siam Popluechai

Archives of oral biology   122   105036 - 105036   2021.2

Gut Microbiota and Short-Chain Fatty Acid Profile between Normal and Moderate Malnutrition Children in Yogyakarta, Indonesia. Reviewed International journal

Rafli Zulfa Kamil, Agnes Murdiati, Mohammad Juffrie, Jiro Nakayama, Endang Sutriswati Rahayu

Microorganisms   9 ( 1 )   1 - 15   2021.1

Processing and secretion of non-cognate bacteriocins by EnkT, an ABC transporter from a multiple-bacteriocin producer, Enterococcus faecium NKR-5-3. Reviewed

Hirotoshi Sushida, Miyuki Sakei, Rodney H Perez, Naoki Ishibashi, Takeshi Zendo, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Journal of bioscience and bioengineering   130 ( 6 )   596 - 603   2020.12

Alteration in faecal bile acids, gut microbial composition and diversity after laparoscopic sleeve gastrectomy Reviewed International journal

T. Ikeda, M. Aida, Y. Yoshida, S. Matsumoto, M. Tanaka, J. Nakayama, Y. Nagao, R. Nakata, E. Oki, T. Akahoshi, S. Okano, M. Nomura, M. Hashizume, Y. Maehara

British Journal of Surgery   107 ( 12 )   1673 - 1685   2020.11

Indonesian children fecal microbiome from birth until weaning was different from microbiomes of their mothers. Reviewed International journal

Wei Wei Thwe Khine, Endang Sutriswati Rahayu, Ting Yi See, Sherwin Kuah, Seppo Salminen, Jiro Nakayama, Yuan-Kun Lee

Gut microbes   12 ( 1 )   1761240 - 1761240   2020.11

Gut dysbiosis associated with clinical prognosis of patients with primary biliary cholangitis. Reviewed International journal

Masanori Furukawa, Kei Moriya, Jiro Nakayama, Takako Inoue, Rie Momoda, Hideto Kawaratani, Tadashi Namisaki, Shinya Sato, Akitoshi Douhara, Kosuke Kaji, Mitsuteru Kitade, Naotaka Shimozato, Yasuhiko Sawada, Soichiro Saikawa, Hiroaki Takaya, Koh Kitagawa, Takemi Akahane, Akira Mitoro, Junichi Yamao, Yasuhito Tanaka, Hitoshi Yoshiji

Hepatology research : the official journal of the Japan Society of Hepatology   50 ( 7 )   840 - 852   2020.7

Impact of pH on succession of sourdough lactic acid bacteria communities and their fermentation properties Reviewed International journal

Mugihito OSHIRO, Masaru TANAKA, Takeshi ZENDO, Jiro NAKAYAMA

Bioscience of Microbiota, Food and Health   39 ( 3 )   152 - 159   2020.7

Age-related changes in the gut microbiota and the core gut microbiome of healthy Thai humans. Reviewed International journal

Orawan La-Ongkham, Massalin Nakphaichit, Jiro Nakayama, Suttipun Keawsompong, Sunee Nitisinprasert

3 Biotech   10 ( 6 )   276 - 276   2020.6

Age-related changes in the gut microbiota and the core gut microbiome of healthy Thai humans. Reviewed International journal

Orawan La-Ongkham, Massalin Nakphaichit, Jiro Nakayama, Suttipun Keawsompong, Sunee Nitisinprasert

3 Biotech   10 ( 6 )   276 - 276   2020.6

Relation between cell-bound exopolysaccharide production via plasmid-encoded genes and rugose colony morphology in the probiotic Lactobacillus brevis KB290. Reviewed International journal

Masanori Fukao, Takeshi Zendo, Takuro Inoue, Nobuo Fuke, Tomoo Moriuchi, Yasuhiro Yamane, Jiro Nakayama, Kenji Sonomoto, Tetsuya Fukaya

Animal science journal = Nihon chikusan Gakkaiho   90 ( 12 )   1575 - 1580   2019.12

The gelatinase biosynthesis-activating pheromone binds and stabilises the FsrB membrane protein in Enterococcus faecalis quorum sensing Reviewed International journal

594 ( 3 )   553 - 563   2019.10

Plasmid-encoded glycosyltransferase operon is responsible for exopolysaccharide production, cell aggregation, and bile resistance in a probiotic strain, Lactobacillus brevis KB290. Reviewed

128 ( 4 )   391 - 397   2019.10

Koji glycosylceramide commonly contained in Japanese traditional fermented foods alters cholesterol metabolism in obese mice. Reviewed International journal

Hiroshi Hamajima, Masaru Tanaka, Miyuki Miyagawa, Mayuko Sakamoto, Tsuyoshi Nakamura, Teruyoshi Yanagita, Megumi Nishimukai, Susumu Mitsutake, Jiro Nakayama, Koji Nagao, Hiroshi Kitagaki

Bioscience, biotechnology, and biochemistry   83 ( 8 )   1514 - 1522   2019.8

Protective effect of lactobacillus reuteri KUB-AC5 against salmonella enteritidis challenge in chickens Reviewed International journal

M. Nakphaichit, S. Sobanbua, S. Siemuang, W. Vongsangnak, Jiro Nakayama, S. Nitisinprasert

Beneficial Microbes   10 ( 1 )   43 - 54   2019.1

Evaluation of leader peptides that affect the secretory ability of a multiple bacteriocin transporter, EnkT. Reviewed

Hirotoshi Sushida, Naoki Ishibashi, Takeshi Zendo, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Journal of bioscience and bioengineering   126 ( 1 )   23 - 29   2018.7

Developing anti-virulence chemotherapies by exploiting the diversity of microbial quorum sensing systems

Basit Yousuf, Keika Adachi, Jiro Nakayama

Biotechnological Applications of Quorum Sensing Inhibitors   151 - 208   2018.5

Developing anti-virulence chemotherapies by exploiting the diversity of microbial quorum sensing systems

Basit Yousuf, Keika Adachi, Jiro Nakayama

Biotechnological Applications of Quorum Sensing Inhibitors   151 - 208   2018.5

Evaluation of leader peptides that affect the secretory ability of a multiple bacteriocin transporter, EnkT Reviewed International journal

Hirotoshi Sushida, Naoki Ishibashi, Takeshi Zendo, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Journal of Bioscience and Bioengineering   2018.1

16S rRNA Metagenomics of Asian Gut Microbiota Invited Reviewed International journal

Juma Kisuse, Jiro Nakayama

Understanding Host-Microbiome Interactions - An Omics Approach Omics of Host-Microbiome Association   71 - 81   2017.9

In vitro synergistic activities of cefazolin and nisin A against mastitis pathogens. Reviewed

Kohei Kitazaki, Shoko Koga, Kohei Nagatoshi, Koichi Kuwano, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto, Hitoshi Ano, Hiromu Katamoto

The Journal of veterinary medical science   79 ( 9 )   1472 - 1479   2017.9

Asian gut microbiome Reviewed

Jiro Nakayama, Heping Zhang, Yuan Kun Lee

Science Bulletin   62 ( 12 )   816 - 817   2017.6

Mutations near the cleavage site of enterocin NKR-5-3B prepeptide reveal new insights into its biosynthesis. Reviewed International journal

Rodney H Perez, Haruki Sugino, Naoki Ishibashi, Takeshi Zendo, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Microbiology (Reading, England)   163 ( 4 )   431 - 441   2017.4

In vitro synergistic activities of cefazolin and nisin a against mastitis pathogens Reviewed

Kohei Kitazaki, Shoko Koga, Kohei Nagatoshi, Koichi Kuwano, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto, Hitoshi Ano, Hiromu Katamoto

Journal of Veterinary Medical Science   79 ( 9 )   1472 - 1479   2017.1

The effects of administration of the Lactobacillus gasseri strain CP2305 on quality of life, clinical symptoms and changes in gene expression in patients with irritable bowel syndrome Reviewed

K. Nobutani, D. Sawada, S. Fujiwara, Y. Kuwano, K. Nishida, J. Nakayama, H. Kutsumi, T. Azuma, K. Rokutan

Journal of Applied Microbiology   122 ( 1 )   212 - 224   2017.1

Japanese traditional dietary fungus koji Aspergillus oryzae functions as a prebiotic for Blautia coccoides through glycosylceramide Japanese dietary fungus koji is a new prebiotic Reviewed

Hiroshi Hamajima, Haruka Matsunaga, Ayami Fujikawa, Tomoya Sato, Susumu Mitsutake, Teruyoshi Yanagita, Koji Nagao, Jiro Nakayama, Hiroshi Kitagaki

SpringerPlus   5 ( 1 )   2016.12

LnqR, a TetR-family transcriptional regulator, positively regulates lacticin Q production in Lactococcus lactis QU 5. Reviewed International journal

Shun Iwatani, Naoki Ishibashi, Floirendo P Flores, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

FEMS microbiology letters   363 ( 18 )   2016.9

Bacterial community structures of deep-sea water investigated by molecular biological techniques. Reviewed International journal

Takeshi Terahara, Katsuhisa Yamada, Jiro Nakayama, Yasuhiro Igarashi, Takeshi Kobayashi, Chiaki Imada

Gene   576 ( 2 Pt 1 )   696 - 700   2016.2

Functional Analysis of Genes Involved in the Biosynthesis of Enterocin NKR-5-3B, a Novel Circular Bacteriocin. Reviewed International journal

Rodney H Perez, Naoki Ishibashi, Tomoko Inoue, Kohei Himeno, Yoshimitsu Masuda, Narukiko Sawa, Takeshi Zendo, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Journal of bacteriology   198 ( 2 )   291 - 300   2016.1

In vitro catalytic activity of N-terminal and C-terminal domains in NukM, the post-translational modification enzyme of nukacin ISK-1. Reviewed

Chinatsu Shimafuji, Megumi Noguchi, Mami Nishie, Jun-Ichi Nagao, Kouki Shioya, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Journal of bioscience and bioengineering   120 ( 6 )   624 - 629   2015.12

Complete genome sequence of Lactobacillus acetotolerans RIB 9124 (NBRC 13120) isolated from putrefied (hiochi) Japanese sake Reviewed

Hidehiro Toh, Hidetoshi Morita, Hiroyuki Tsuji, Kazuhiro Iwashita, Nami Goto, Jiro Nakayama, Mitsuo Sekine, Yumiko Kato, Ken Ichiro Suzuki, Nobuyuki Fujita

Journal of Biotechnology   214   214 - 215   2015.11

Rationale design of quorum-quenching peptides that target the VirSR system of Clostridium perfringens. Reviewed International journal

Ravindra Pal Singh, Ken-Ichi Okubo, Kaori Ohtani, Keika Adachi, Kenji Sonomoto, Jiro Nakayama

FEMS microbiology letters   362 ( 22 )   2015.11

Complete genome sequence of Lactobacillus acetotolerans RIB 9124 (NBRC 13120) isolated from putrefied (hiochi) Japanese sake. Reviewed International journal

Hidehiro Toh, Hidetoshi Morita, Hiroyuki Tsuji, Kazuhiro Iwashita, Nami Goto, Jiro Nakayama, Mitsuo Sekine, Yumiko Kato, Ken-ichiro Suzuki, Nobuyuki Fujita

Journal of biotechnology   214   214 - 5   2015.11

Arthroamide, a Cyclic Depsipeptide with Quorum Sensing Inhibitory Activity from Arthrobacter sp. Reviewed International journal

Yasuhiro Igarashi, Kazuki Yamamoto, Takao Fukuda, Akane Shojima, Jiro Nakayama, Lorena Carro, Martha E Trujillo

Journal of natural products   78 ( 11 )   2827 - 2831   2015.11

Identification, Characterization, and Three-Dimensional Structure of the Novel Circular Bacteriocin, Enterocin NKR-5-3B, from Enterococcus faecium. Reviewed International journal

Biochemistry   54 ( 31 )   4863 - 4876   2015.8

Cyclodepsipeptides produced by actinomycetes inhibit cyclic-peptide-mediated quorum sensing in Gram-positive bacteria. Reviewed International journal

Said E Desouky, Akane Shojima, Ravindra Pal Singh, Takahisa Matsufuji, Yasuhiro Igarashi, Takashi Suzuki, Tohru Yamagaki, Ken-Ichi Okubo, Kaori Ohtani, Kenji Sonomoto, Jiro Nakayama

FEMS microbiology letters   362 ( 14 )   2015.7

Development of quorum-sensing inhibitors targeting the fsr system of enterococcus faecalis Reviewed

Ravindra Pal Singh, Jiro Nakayama

Quorum Sensing vs Quorum Quenching: A Battle with no end in Sight   319 - 326   2015.1

Development of quorum-sensing inhibitors targeting the fsr system of enterococcus faecalis Reviewed

Ravindra Pal Singh, Jiro Nakayama

Quorum Sensing vs Quorum Quenching: A Battle with no end in Sight   319 - 326   2015.1

Quorum-sensing systems in enterococci Reviewed

Ravindra Pal Singh, Jiro Nakayama

Quorum Sensing vs Quorum Quenching: A Battle with no end in Sight   155 - 163   2015.1

Effects of bifidobacterial supplementation to pregnant women and infants in the prevention of allergy development in infants and on fecal microbiota. Reviewed International journal

Tadao Enomoto, Masanori Sowa, Keiji Nishimori, Shinichiro Shimazu, Akira Yoshida, Kazuko Yamada, Fukumi Furukawa, Takemasa Nakagawa, Naotake Yanagisawa, Noriyuki Iwabuchi, Toshitaka Odamaki, Fumiaki Abe, Jiro Nakayama, Jin-Zhong Xiao

Allergology international : official journal of the Japanese Society of Allergology   63 ( 4 )   575 - 85   2014.12

Gene cluster responsible for secretion of and immunity to multiple bacteriocins, the NKR-5-3 enterocins. Reviewed International journal

Naoki Ishibashi, Kohei Himeno, Yoshimitsu Masuda, Rodney Honrada Perez, Shun Iwatani, Takeshi Zendo, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Applied and environmental microbiology   80 ( 21 )   6647 - 55   2014.11

Monitoring of the microbiota profile in nukadoko, a naturally fermented rice bran bed for pickling vegetables. Reviewed

Hiroshi Ono, Shoko Nishio, Jun Tsurii, Tetsuhiro Kawamoto, Kenji Sonomoto, Jiro Nakayama

Journal of bioscience and bioengineering   118 ( 5 )   520 - 5   2014.11

Effects of Japanese pepper and red pepper on the microbial community during nukadoko fermentation Reviewed International journal

H. Ono, S. Nishio, J. Tsurii, T. Kawamoto, K. Sonomoto and J. Nakayama

Biosci Microbiota Food Health   34 ( 1 )   2014.9

Senior Thai fecal microbiota comparison between vegetarians and non-vegetarians using PCR-DGGE and real-time PCR. Reviewed International journal

Supatjaree Ruengsomwong, Yuki Korenori, Naoshige Sakamoto, Bhusita Wannissorn, Jiro Nakayama, Sunee Nitisinprasert

Journal of microbiology and biotechnology   24 ( 8 )   1026 - 33   2014.8

Biological function of a DUF95 superfamily protein involved in the biosynthesis of a circular bacteriocin, leucocyclicin Q. Reviewed

Fuqin Mu, Yoshimitsu Masuda, Takeshi Zendo, Hiroshi Ono, Hiroshi Kitagawa, Haruo Ito, Jiro Nakayama, Kenji Sonomoto

Journal of bioscience and bioengineering   117 ( 2 )   158 - 164   2014.2

Draft Genome Sequence of Lactobacillus namurensis Chizuka 01, Isolated from Nukadoko, a Pickling Bed of Fermented Rice Bran. Reviewed International journal

Keita Kato, Hidehiro Toh, Naoshige Sakamoto, Kazuki Mori, Kosuke Tashiro, Naruhiro Hibi, Kenji Sonomoto, Jiro Nakayama

Genome announcements   2 ( 1 )   2014.2

Bactericidal activity of nukacin ISK-1 An alternative mode of action Reviewed

Urmi Roy, Mohammad Riazul Islam, Jun Ichi Nagao, Hiroshi Iida, Abdullah Al Mahin, Mengqi Li, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   78 ( 7 )   1270 - 1273   2014.1

Transcriptomic study reveals new pathways and genes involved in Enterococcus faecalis V583 response to a therapeutic dose of vancomycin Reviewed

Archives of Clinical Microbiology   5 ( 1 )   2014.1

Gene cluster responsible for secretion of and immunity to multiple bacteriocins, the NKR-5-3 enterocins Reviewed

Naoki Ishibashi, Kohei Himeno, Yoshimitsu Masuda, Rodney Honrada Perez, Shun Iwatani, Takeshi Zendo, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Applied and Environmental Microbiology   80 ( 21 )   6647 - 6655   2014.1

Effects of bifidobacterial supplementation to pregnant women and infants in the prevention of allergy development in infants and on fecal microbiota Reviewed

Tadao Enomoto, Masanori Sowa, Keiji Nishimori, Shinichiro Shimazu, Akira Yoshida, Kazuko Yamada, Fukumi Furukawa, Takemasa Nakagawa, Naotake Yanagisawa, Noriyuki Iwabuchi, Toshitaka Odamaki, Fumiaki Abe, Jiro Nakayama, Jin Zhong Xiao

Allergology International   63 ( 4 )   575 - 585   2014.1

Lethal hydroxyl radical accumulation by a lactococcal bacteriocin, lacticin Q. Reviewed International journal

Mengqi Li, Fuminori Yoneyama, Nayu Toshimitsu, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Antimicrobial agents and chemotherapy   57 ( 8 )   3897 - 3902   2013.8

Drosophila Host Model Reveals New Enterococcus faecalis Quorum-Sensing Associated Virulence Factors Reviewed

PLoS One   8 ( 5 )   2013.5

Up to species-level community analysis of human gut microbiota by 16S rRNA amplicon pyrosequencing Reviewed International journal

Nakayama, J., Jiang, J., Watanabe, K., Chen, K., Ninxin, H., Matsuda, K., Kurakawa, T., Tsuji, H., Sonomoto, K., and Lee, Y.-K.

Bioscience, Microflora, Food, Health   32   2013.5

Bifunctional gene cluster lnqBCDEF mediates bacteriocin production and immunity with differential genetic requirements. Reviewed International journal

Shun Iwatani, Yuko Horikiri, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Applied and environmental microbiology   79 ( 7 )   2446 - 2449   2013.4

Interactions of the intact FsrC membrane histidine kinase with the tricyclic peptide inhibitor siamycin I revealed through synchrotron radiation circular dichroism. Reviewed International journal

Mary K Phillips-Jones, Simon G Patching, Shalini Edara, Jiro Nakayama, Rohanah Hussain, Giuliano Siligardi

Physical chemistry chemical physics : PCCP   15 ( 2 )   444 - 447   2013.1

Identification of the genes involved in the secretion and self-immunity of lacticin Q, an unmodified leaderless bacteriocin from Lactococcus lactis QU 5. Reviewed International journal

Shun Iwatani, Fuminori Yoneyama, Shiho Miyashita, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Microbiology (Reading, England)   158 ( 12 )   2927 - 2935   2012.12

Monitoring of the multiple bacteriocin production by Enterococcus faecium NKR-5-3 through a developed liquid chromatography and mass spectrometry-based quantification system. Reviewed

Rodney H Perez, Kohei Himeno, Naoki Ishibashi, Yoshimitsu Masuda, Takeshi Zendo, Koji Fujita, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Journal of bioscience and bioengineering   114 ( 5 )   490 - 496   2012.11

Interactions of the intact FsrC membrane histidine kinase with its pheromone ligand GBAP revealed through synchrotron radiation circular dichroism Reviewed

Simon G. Patching, Shalini Edara, Pikyee Ma, Jiro Nakayama, Rohanah Hussain, Giuliano Siligardi, Mary K. Phillips-Jones

Biochimica et Biophysica Acta - Biomembranes   1818 ( 7 )   1595 - 1602   2012.7

Identification of enterocin NKR-5-3C, a novel class IIa bacteriocin produced by a multiple bacteriocin producer, Enterococcus faecium NKR-5-3 Reviewed

Kohei Himeno, Koji Fujita, Takeshi Zendo, Pongtep Wilaipun, Naoki Ishibashi, Yoshimitsu Masuda, Fuminori Yoneyama, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   76 ( 6 )   1245 - 1247   2012.6

Purification and characterization of multiple bacteriocins and an inducing peptide produced by Enterococcus faecium NKR-5-3 from Thai fermented fish Reviewed

Naoki Ishibashi, Kohei Himeno, Koji Fujita, Yoshimitsu Masuda, Rodney Honrada Perez, Takeshi Zendo, Pongtep Wilaipun, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   76 ( 5 )   947 - 953   2012.5

The incongruent gelatinase genotype and phenotype in Enterococcus faecalis are due to shutting off the ability to respond to the gelatinase biosynthesis-activating pheromone (GBAP) quorum-sensing signal Reviewed

Microbiology   158 ( 2 )   519 - 528   2012.2

The incongruent gelatinase genotype and phenotype in Enterococcus faecalis are due to shutting off the ability to respond to the gelatinase biosynthesis-activating pheromone (GBAP) quorum-sensing signal. Reviewed International journal

Microbiology (Reading, England)   158 ( 2 )   519 - 528   2012.2

Ring A of nukacin ISK-1: a lipid II-binding motif for type-A(II) lantibiotic. Reviewed International journal

Mohammad R Islam, Mami Nishie, Jun-ichi Nagao, Takeshi Zendo, Sandro Keller, Jiro Nakayama, Daisuke Kohda, Hans-Georg Sahl, Kenji Sonomoto

Journal of the American Chemical Society   134 ( 8 )   3687 - 3690   2012.2

Isolation and characterization of enterocin W, a novel two-peptide lantibiotic produced by Enterococcus faecalis NKR-4-1. Reviewed International journal

Naruhiko Sawa, Pongtep Wilaipun, Seisuke Kinoshita, Takeshi Zendo, Vichien Leelawatcharamas, Jiro Nakayama, Kenji Sonomoto

Applied and environmental microbiology   78 ( 3 )   900 - 903   2012.2

Characterization and identification of weissellicin Y and weissellicin M, novel bacteriocins produced by Weissella hellenica QU 13 Reviewed

Y. Masuda, T. Zendo, N. Sawa, R. H. Perez, J. Nakayama, K. Sonomoto

Journal of Applied Microbiology   112 ( 1 )   99 - 108   2012.1

Enhanced production of nukacin D13E in Lactococcus lactis NZ9000 by the additional expression of immunity genes. Reviewed International journal

Tijo Varghese Puramattathu, Mohammad R Islam, Mami Nishie, Sae Yanagihara, Jun-ichi Nagao, Ken-ichi Okuda, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Applied microbiology and biotechnology   93 ( 2 )   671 - 678   2012.1

Engineering unusual amino acids into peptides using lantibiotic synthetase

Jun Ichi Nagao, Kouki Shioya, Yoshitaka Harada, Ken Ichi Okuda, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Heterologous Gene Expression in E.coli Methods and Protocols   705   225 - 236   2011.12

The effect of including Lactobacillus reuteri KUB-AC5 during post-hatch feeding on the growth and ileum microbiota of broiler chickens Reviewed

M. Nakphaichit, S. Thanomwongwattana, C. Phraephaisarn, N. Sakamoto, S. Keawsompong, J. Nakayama, S. Nitisinprasert

Poultry Science   90 ( 12 )   2753 - 2765   2011.12

Survey of Overactive Bladder Symptoms Influencing Bother Before and After Treatment With Tamsulosin Hydrochloride in Japanese Patients With Benign Prostatic Hyperplasia Reviewed

Akira Tsujimura, Tetsuya Takao, Yasushi Miyagawa, Hidenobu Okuda, Keisuke Yamamoto, Shinichiro Fukuhara, Jiro Nakayama, Tomohiro Ueda, Hiroshi Kiuchi, Toshiaki Hirai, Yuichi Tsujimoto, Hidenobu Miura, Nobuteru Kanno, Makoto Higashino, Yoshihiro Nakamura, Kenji Nishimura, Norio Nonomura

UROLOGY   78 ( 5 )   1058 - 1062   2011.11

Anti-HIV siamycin I directly inhibits autophosphorylation activity of the bacterial FsrC quorum sensor and other ATP-dependent enzyme activities. Reviewed International journal

Pikyee Ma, Kenzo Nishiguchi, Hayley M Yuille, Lianne M Davis, Jiro Nakayama, Mary K Phillips-Jones

FEBS letters   585 ( 17 )   2660 - 2664   2011.9

Crystallization and preliminary X-ray analysis of a putative sensor histidine kinase domain: the C-terminal domain of HksP4 from Aquifex aeolicus VF5. Reviewed International journal

Shoichiro Horita, Yosuke Yamanaka, Akihiro Yamamura, Akitoshi Okada, Jiro Nakayama, Koji Nagata, Masaru Tanokura

Acta crystallographica. Section F, Structural biology and crystallization communications   67 ( 7 )   803 - 807   2011.7

Lacticin Q-mediated selective toxicity depending on physicochemical features of membrane components Reviewed

Fuminori Yoneyama, Kanako Ohno, Yuichi Imura, Mengqi Li, Takeshi Zendo, Jiro Nakayama, Katsumi Matsuzaki, Kenji Sonomoto

Antimicrobial Agents and Chemotherapy   55 ( 5 )   2446 - 2450   2011.5

Lantibiotic transporter requires cooperative functioning of the peptidase domain and the ATP binding domain Reviewed

Mami Nishie, Makoto Sasaki, Jun Ichi Nagao, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Journal of Biological Chemistry   286 ( 13 )   11163 - 11169   2011.4

Urgency Is an Independent Factor for Sleep Disturbance in Men with Obstructive Sleep Apnea Reviewed

Akira Tsujimura, Tetsuya Takao, Yasushi Miyagawa, Keisuke Yamamoto, Shinichiro Fukuhara, Jiro Nakayama, Hiroshi Kiuchi, Nakamori Suganuma, Tadashi Nakamura, Takayuki Kumano-go, Yoshiro Sugita, Norio Nonomura, Akihiko Okuyama

UROLOGY   76 ( 4 )   967 - 970   2010.10

Enterocin X, a novel two-peptide bacteriocin from Enterococcus faecium KU-B5, has an antibacterial spectrum entirely different from those of its component peptides. Reviewed International journal

Chih-Bo Hu, Wanna Malaphan, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Applied and environmental microbiology   76 ( 13 )   4542 - 4545   2010.7

Identification and characterization of novel multiple bacteriocins produced by Leuconostoc pseudomesenteroides QU 15 Reviewed

N. Sawa, K. Okamura, T. Zendo, K. Himeno, J. Nakayama, K. Sonomoto

Journal of Applied Microbiology   109 ( 1 )   282 - 291   2010.7

Functional significance of the E loop, a novel motif conserved in the lantibiotic immunity ATP-binding cassette transport systems. Reviewed International journal

Ken-ichi Okuda, Sae Yanagihara, Tomomichi Sugayama, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Journal of bacteriology   192 ( 11 )   2801 - 2808   2010.6

Characterization of modification enzyme NukM and engineering of a novel thioether bridge in lantibiotic nukacin ISK-1. Reviewed International journal

Kouki Shioya, Yoshitaka Harada, Jun-ichi Nagao, Jiro Nakayama, Kenji Sonomoto

Applied microbiology and biotechnology   86 ( 3 )   891 - 899   2010.4

Cell-to-cell communications among microorganisms

Sueharu Horinouchi, Kenji Ueda, Jiro Nakayama, Tsukasa Ikeda

Comprehensive Natural Products II: Chemistry and Biology   4   283 - 337   2010.3

Effect of a negatively charged lipid on membrane-lacticin Q interaction and resulting pore formation Reviewed

Fuminori Yoneyama, Kouki Shioya, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   74 ( 1 )   218 - 221   2010.2

Adiponectin and testosterone in patients with symptoms of late-onset hypogonadism: Is there a link? Reviewed

Akira Tsujimura, Shingo Takada, Yasuhiro Matsuoka, Jiro Nakayama, Tetsuya Takao, Yasushi Miyagawa, Mina Sonoda, Hitoshi Nishizawa, Hiromi Iwahashi, Tohru Funahashi, Norio Nonomura, Akihiko Okuyama

INTERNATIONAL JOURNAL OF UROLOGY   16 ( 10 )   830 - 835   2009.10

Mapping and identification of the region and secondary structure required for the maturation of the nukacin ISK-1 prepeptide. Reviewed International journal

Jun-Ichi Nagao, Yoshiko Morinaga, Mohammad R Islam, Sikder M Asaduzzaman, Yuji Aso, Jiro Nakayama, Kenji Sonomoto

Peptides   30 ( 8 )   1412 - 1420   2009.8

Peptide-lipid huge toroidal pore, a new antimicrobial mechanism mediated by a lactococcal bacteriocin, lacticin Q. Reviewed International journal

Fuminori Yoneyama, Yuichi Imura, Kanako Ohno, Takeshi Zendo, Jiro Nakayama, Katsumi Matsuzaki, Kenji Sonomoto

Antimicrobial agents and chemotherapy   53 ( 8 )   3211 - 3217   2009.8

Nukacin ISK-1, a bacteriostatic lantibiotic. Reviewed International journal

Sikder M Asaduzzaman, Jun-ichi Nagao, Hiroshi Iida, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Antimicrobial agents and chemotherapy   53 ( 8 )   3595 - 8   2009.8

Evaluation of essential and variable residues of nukacin ISK-1 by NNK scanning Reviewed

Mohammad R. Islam, K. Shioya, J. Nagao, M. Nishie, H. Jikuya, T. Zendo, J. Nakayama, K. Sonomoto

Molecular Microbiology   72 ( 6 )   1438 - 1447   2009.6

TRANSPLANTATION OF OLFACTORY MUCOSA FOLLOWING SPINAL CORD INJURY IMPROVES VOIDING EFFICIENCY IN RAT Reviewed

Jiro Nakayama, Keisuke Yamamoto, Shinichiro Fukuhara, Toshiaki Hirai, Tomohiro Ueda, Hiroshi Kiuchi, Tetsuya Takao, Yasushi Miyagawa, Akira Tsujimura, Akihiko Okuyama

JOURNAL OF UROLOGY   181 ( 4 )   337 - 337   2009.4

Identification and characterization of lactocyclicin Q, a novel cyclic bacteriocin produced by Lactococcus sp. strain QU 12. Reviewed International journal

Naruhiko Sawa, Takeshi Zendo, Junko Kiyofuji, Koji Fujita, Kohei Himeno, Jiro Nakayama, Kenji Sonomoto

Applied and environmental microbiology   75 ( 6 )   1552 - 1558   2009.3

Two-peptide bacteriocin from Lactobacillus plantarum PMU 33 strain isolated from som-fak, a Thai low salt fermented fsh product

W. Noonpakdee, P. Jumriangrit, K. Wittayakom, J. Zendo, J. Nakayama, K. Sonomoto, S. Panyim

Asia-Pacific Journal of Molecular Biology and Biotechnology   17 ( 1 )   19 - 25   2009.1

Two-peptide bacteriocin from Lactobacillus plantarum PMU 33 strain isolated from som-fak, a Thai low salt fermented fsh product

W. Noonpakdee, P. Jumriangrit, K. Wittayakom, J. Zendo, J. Nakayama, K. Sonomoto, S. Panyim

Asia-Pacific Journal of Molecular Biology and Biotechnology   17 ( 1 )   19 - 25   2009.1

Lacticin Q, a lactococcal bacteriocin, causes high-level membrane permeability in the absence of specific receptors. Reviewed International journal

Fuminori Yoneyama, Yuichi Imura, Shiro Ichimasa, Koji Fujita, Takeshi Zendo, Jiro Nakayama, Katsumi Matsuzaki, Kenji Sonomoto

Applied and environmental microbiology   75 ( 2 )   538 - 541   2009.1

Biosynthetic characterization and biochemical features of the third natural nisin variant, nisin Q, produced by Lactococcus lactis 61-14 Reviewed

F. Yoneyama, M. Fukao, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Journal of Applied Microbiology   105 ( 6 )   1982 - 1990   2008.12

Two homologous Agr-like quorum-sensing systems cooperatively control adherence, cell morphology, and cell viability properties in Lactobacillus plantarum WCFS1. Reviewed International journal

Toshio Fujii, Colin Ingham, Jiro Nakayama, Marke Beerthuyzen, Ryoko Kunuki, Douwe Molenaar, Mark Sturme, Elaine Vaughan, Michiel Kleerebezem, Willem de Vos

Journal of bacteriology   190 ( 23 )   7655 - 65   2008.12

Biosynthetic characterization and biochemical features of the third natural nisin variant, nisin Q, produced by Lactococcus lactis 61-14 Reviewed

F. Yoneyama, M. Fukao, T. Zendo, J. Nakayama, K. Sonomoto

Journal of Applied Microbiology   105 ( 6 )   1982 - 1990   2008.12

Binding specificity of the lantibiotic-binding immunity protein NukH. Reviewed International journal

Ken-ichi Okuda, Sae Yanagihara, Kouki Shioya, Yoshitaka Harada, Jun-ichi Nagao, Yuji Aso, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Applied and environmental microbiology   74 ( 24 )   7613 - 7619   2008.12

Identification and partial characterization of pediocin PA-1 producing Pediococcus pentosaceus associated in traditional Thai fermented beef (mum) Reviewed

Adisorn Swetwiwathana, Yaowalak Surapantapisit, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

JOURNAL OF BIOTECHNOLOGY   136   S748 - S749   2008.10

Description of durancin TW-49M, a novel enterocin B-homologous bacteriocin in carrot-isolated Enterococcus durans QU 49 Reviewed

C. B. Hu, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Journal of Applied Microbiology   105 ( 3 )   681 - 690   2008.9

Expression, purification and activities of the entire family of intact membrane sensor kinases from Enterococcus faecalis. Reviewed International journal

Molecular membrane biology   25 ( 6-7 )   449 - 473   2008.9

Identification of the nukacin KQU-131, a new type-A(II) lantibiotic produced by Staphylococcus hominis KQU-131 isolated from Thai fermented fish product (Pla-ra). Reviewed International journal

Pongtep Wilaipun, Takeshi Zendo, Ken-ichi Okuda, Jiro Nakayama, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   72 ( 8 )   2232 - 2235   2008.8

Complete covalent structure of nisin Q, new natural nisin variant, containing post-translationally modified amino acids. Reviewed International journal

Masanori Fukao, Takayuki Obita, Fuminori Yoneyama, Daisuke Kohda, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   72 ( 7 )   1750 - 5   2008.7

In vivo and in vitro complementation study comparing the function of DnaK chaperone systems from halophilic lactic acid bacterium Tetragenococcus halophilus and Escherichia coli. Reviewed International journal

Shinya Sugimoto, Kozue Saruwatari, Chihana Higashi, Keigo Tsuruno, Shunsuke Matsumoto, Jiro Nakayama, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   72 ( 3 )   811 - 22   2008.3

Bacteriocin detection by liquid chromatography/mass spectrometry for rapid identification Reviewed

T. Zendo, J. Nakayama, K. Fujita, K. Sonomoto

Journal of Applied Microbiology   104 ( 2 )   499 - 507   2008.2

Complete covalent structure of nisin Q, new natural nisin variant, containing post-translationally modified amino acids Reviewed

Masanori Fukao, Takayuki Obita, Fuminori Yoneyama, Daisuke Kohda, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   72 ( 7 )   1750 - 1755   2008.1

Cooperative transport between NukFEG and NukH in immunity against the lantibiotic nukacin ISK-1 produced by Staphylococcus warneri ISK-1. Reviewed International journal

Ken-ichi Okuda, Yuji Aso, Jiro Nakayama, Kenji Sonomoto

Journal of bacteriology   190 ( 1 )   356 - 62   2008.1

In vivo and in vitro complementation study comparing the function of DnaK chaperone systems from halophilic lactic acid bacterium Tetragenococcus halophilus and Escherichia coli Reviewed

Shinya Sugimoto, Kozue Saruwatari, Chihana Higashi, Keigo Tsuruno, Shunsuke Matsumoto, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   72 ( 3 )   811 - 822   2008.1

Cooperative transport between NukFEG and NukH in immunity against the lantibiotic nukacin ISK-1 produced by Staphylococcus warneri ISK-1 Reviewed

Ken Ichi Okuda, Yuji Aso, Jiro Nakayama, Kenji Sonomoto

Journal of Bacteriology   190 ( 1 )   356 - 362   2008.1

Characterization and structure analysis of a novel bacteriocin, lacticin Z, produced by Lactococcus lactis QU 14 Reviewed

Shun Iwatani, Takeshi Zendo, Fuminori Yoneyama, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   71 ( 8 )   1984 - 1992   2007.11

Characterization, N-terminal sequencing and classification of cerein MRX1, a novel bacteriocin purified from a newly isolated bacterium: Bacillus cereus MRX1 Reviewed

S. Sebei, T. Zendo, A. Boudabous, J. Nakayama, K. Sonomoto

Journal of Applied Microbiology   103 ( 5 )   1621 - 1631   2007.11

Characterization, N-terminal sequencing and classification of cerein MRX1, a novel bacteriocin purified from a newly isolated bacterium Bacillus cereus MRX1 Reviewed

S. Sebei, Takeshi Zendo, A. Boudabous, Jiro Nakayama, Kenji Sonomoto

Journal of Applied Microbiology   103 ( 5 )   1621 - 1631   2007.11

Differences in developing intestinal microbiota between allergic and non-allergic infants: a pilot study in Japan. Reviewed International journal

Prapa Songjinda, Jiro Nakayama, Atsushi Tateyama, Shigemitsu Tanaka, Mina Tsubouchi, Chikako Kiyohara, Taro Shirakawa, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   71 ( 9 )   2338 - 42   2007.9

Characterization and structure analysis of a novel bacteriocin, lacticin Z, produced by Lactococcus lactis QU 14. Reviewed International journal

Shun Iwatani, Takeshi Zendo, Fuminori Yoneyama, Jiro Nakayama, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   71 ( 8 )   1984 - 92   2007.8

A gram-negative characteristic segment in Escherichia coli DnaK is essential for the ATP-dependent cooperative function with the co-chaperones DnaJ and GrpE. Reviewed International journal

Shinya Sugimoto, Chihana Higashi, Kozue Saruwatari, Jiro Nakayama, Kenji Sonomoto

FEBS letters   581 ( 16 )   2993 - 2999   2007.6

Structural analysis and characterization of lacticin Q, a novel bacteriocin belonging to a new family of unmodified bacteriocins of gram-positive bacteria. Reviewed International journal

Koji Fujita, Shiro Ichimasa, Takeshi Zendo, Shoko Koga, Fuminori Yoneyama, Jiro Nakayama, Kenji Sonomoto

Applied and environmental microbiology   73 ( 9 )   2871 - 3877   2007.5

Cooperative transport mechanism between NukFEG and NukH in immunity process against the lantibiotic nukacin ISK-1 produced by Staphylococcus warneri ISK-1 Reviewed International journal

Okuda, K., Y. Aso, J. Nakayama, K. Sonomoto

J. Bacteriol.,   2007.1

Maturation of Nahm ? a Thai fermented meat product. Effect of pediocin PA-1 producer (Pediococcus pentosaceus TISTR 536) as starter culture, nitrite and garlic on Salmonella anatum during Nham fermentation Reviewed International journal

Swetwiwathana, A., L. Napha, J. Nakayama, K. Sonomoto

Fleischwirtschaft International   22 ( 3 )   46 - 49   2007.1

Structural and functional conversion of molecular chaperone ClpB from the gram-positive halophilic lactic acid bacterium Tetragenococcus halophilus mediated by ATP and stress Reviewed

Shinya Sugimoto, Hiroyuki Yoshida, Yoshimitsu Mizunoe, Keigo Tsuruno, Jiro Nakayama, Kenji Sonomoto

Journal of Bacteriology   188 ( 23 )   8070 - 8078   2006.12

Structural and functional conversion of molecular chaperone ClpB from the gram-positive halophilic lactic acid bacterium Tetragenococcus halophilus mediated by ATP and stress. Reviewed International journal

Shinya Sugimoto, Hiroyuki Yoshida, Yoshimitsu Mizunoe, Keigo Tsuruno, Jiro Nakayama, Kenji Sonomoto

Journal of bacteriology   188 ( 23 )   8070 - 8   2006.12

Lantibiotics: insight and foresight for new paradigm. Reviewed

Jun-ichi Nagao, Sikder M Asaduzzaman, Yuji Aso, Ken-Ichi Okuda, Jiro Nakayama, Kenji Sonomoto

Journal of bioscience and bioengineering   102 ( 3 )   139 - 49   2006.9

Lysine-oriented charges trigger the membrane binding and activity of nukacin ISK-1. Reviewed International journal

Sikder M Asaduzzaman, Jun-Ichi Nagao, Yuji Aso, Jiro Nakayama, Kenji Sonomoto

Applied and environmental microbiology   72 ( 9 )   6012 - 7   2006.9

Lantibiotics: insight and foresight for new paradigm. Reviewed

Jun-ichi Nagao, Sikder M Asaduzzaman, Yuji Aso, Ken-Ichi Okuda, Jiro Nakayama, Kenji Sonomoto

Journal of bioscience and bioengineering   102 ( 3 )   139 - 49   2006.9

Lysine-oriented charges trigger the membrane binding and activity of nukacin ISK-1 Reviewed

Sikder M. Asaduzzaman, Jun Ichi Nagao, Yuji Aso, Jiro Nakayama, Kenji Sonomoto

Applied and Environmental Microbiology   72 ( 9 )   6012 - 6017   2006.9

Lactococcin Q, a novel two-peptide bacteriocin produced by Lactococcus lactis QU 4. Reviewed International journal

Takeshi Zendo, Shoko Koga, Yasushi Shigeri, Jiro Nakayama, Kenji Sonomoto

Applied and environmental microbiology   72 ( 5 )   3383 - 3389   2006.5

Purification and amino acid sequence of a bacteriocins produced by Lactobacillus salivarius K7 isolated from chicken intestine

Komkhae Pilasombut, Thavajchai Sakpuaram, Worawidh Wajjwalku, Sunee Nitisinprasert, Adisorn Swetwiwathana, Takeshi Zendo, Koji Fujita, Jiro Nakayama, Kenji Sonomoto

Songklanakarin Journal of Science and Technology   28 ( SUPPL. 1 )   121 - 131   2006.3

Identification and production of a bacteriocin from Enterococcus mundtii QU 2 isolated from soybean Reviewed

Takeshi Zendo, N. Eungruttanagorn, S. Fujioka, Yukihiro Tashiro, K. Nomura, Y. Sera, G. Kobayashi, Jiro Nakayama, A. Ishizaki, Kenji Sonomoto

Journal of Applied Microbiology   99 ( 5 )   1181 - 1190   2005.11

Lanthionine introduction into nukacin ISK-1 prepeptide by co-expression with modification enzyme NukM in Escherichia coli. International journal

Jun-Ichi Nagao, Yoshitaka Harada, Kouki Shioya, Yuji Aso, Takeshi Zendo, Jiro Nakayama, Kenji Sonomoto

Biochemical and biophysical research communications   336 ( 2 )   507 - 513   2005.10

A novel type of immunity protein, NukH, for the lantibiotic nukacin ISK-1 produced by Staphylococcus warneri ISK-1 Reviewed

Yuji Aso, Ken Ichi Okuda, Jun Ichi Nagao, Youhei Kanemasa, Nguyen Thi Bich Phuong, Hanako Koga, Kouki Shioya, Toshihiro Sashihara, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   69 ( 7 )   1403 - 1410   2005.9

Characterization of functional domains of lantibiotic-binding immunity protein, NukH, from Staphylococcus warneri ISK-1. Reviewed International journal

Ken-ichi Okuda, Yuji Aso, Jun-ichi Nagao, Kouki Shioya, Youhei Kanemasa, Jiro Nakayama, Kenji Sonomoto

FEMS microbiology letters   250 ( 1 )   19 - 25   2005.9

Localization and interaction of the biosynthetic proteins for the lantibiotic, nukacin ISK-1 Reviewed

Jun Ichi Nagao, Yuji Aso, Toshihiro Sashihara, Kouki Shioya, Asaho Adachi, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   69 ( 7 )   1341 - 1347   2005.9

Characterization of functional domains of lantibiotic-binding immunity protein, NukH, from Staphylococcus warneri ISK-1 Reviewed

Ken Ichi Okuda, Yuji Aso, Jun Ichi Nagao, Kouki Shioya, Youhei Kanemasa, Jiro Nakayama, Kenji Sonomoto

FEMS Microbiology Letters   250 ( 1 )   19 - 25   2005.9

A novel type of immunity protein, NukH, for the lantibiotic nukacin ISK-1 produced by Staphylococcus warneri ISK-1. Reviewed International journal

Yuji Aso, Ken-ichi Okuda, Jun-ichi Nagao, Youhei Kanemasa, Nguyen Thi Bich Phuong, Hanako Koga, Kouki Shioya, Toshihiro Sashihara, Jiro Nakayama, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   69 ( 7 )   1403 - 10   2005.7

Localization and interaction of the biosynthetic proteins for the lantibiotic, Nukacin ISK-1. Reviewed International journal

Jun-ichi Nagao, Yuji Aso, Toshihiro Sashihara, Kouki Shioya, Asaho Adachi, Jiro Nakayama, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   69 ( 7 )   1341 - 7   2005.7

Description of complete DNA sequence of two plasmids from the nukacin ISK-1 producer, Staphylococcus warneri ISK-1. Reviewed International journal

Yuji Aso, Hanako Koga, Toshihiro Sashihara, Jun-Ichi Nagao, Youhei Kanemasa, Jiro Nakayama, Kenji Sonomoto

Plasmid   53 ( 2 )   164 - 178   2005.3

Molecular monitoring of the developmental bacterial community in the gastrointestinal tract of Japanese infants. Reviewed International journal

Prapa Songjinda, Jiro Nakayama, Yumiko Kuroki, Shigemitsu Tanaka, Sanae Fukuda, Chikako Kiyohara, Tetsuro Yamamoto, Kunio Izuchi, Taro Shirakawa, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   69 ( 3 )   638 - 41   2005.3

Reconstitution and function of Tetragenococcus halophila chaperonin 60 tetradecamer. Reviewed

Amonlaya Tosukhowong, Jiro Nakayama, Yoshimitsu Mizunoe, Shinya Sugimoto, Daisuke Fukuda, Kenji Sonomoto

Journal of bioscience and bioengineering   99 ( 1 )   30 - 7   2005.1

Characterization of a gene cluster of Staphylococcus warneri ISK-1 encoding the biosynthesis of and immunity to the lantibiotic, nukacin ISK-1. International journal

Yuji Aso, Toshihiro Sashihara, Jun-Ichi Nagao, Youhei Kanemasa, Hanako Koga, Taku Hashimoto, Toshimasa Higuchi, Asaho Adachi, Harumi Nomiyama, Ayaaki Ishizaki, Jiro Nakayama, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   68 ( 8 )   1663 - 1671   2004.8

Heterologous expression and functional analysis of the gene cluster for the biosynthesis of and immunity to the lantibiotic, nukacin ISK-1 Reviewed

Yuji Aso, Jun Ichi Nagao, Hanako Koga, Ken Ichi Okuda, Youhei Kanemasa, Toshihiro Sashihara, Jiro Nakayama, Kenji Sonomoto

Journal of Bioscience and Bioengineering   98 ( 6 )   429 - 436   2004.1

The two-synergistic peptide bacteriocin produced by Enterococcus faecium NKR-5-3 isolated from Thai fermented fish (Plara). Reviewed International journal

Wilaipun, P., T. Zendo, M. Sangjindavong, S. Nitisinprasert, V. Leelawatcharamas, J. Nakayama, and K. Sonomoto

ScienceAsia   - 30   2004.1

Nucleotide sequences of genes encoding allosamidin-sensitive and -insensitive chitinases produced by allosamidin-producing Streptomyces. Reviewed International journal

Hiroshi Matsuura, Susumu Okamoto, Sarintip Anamnart, Qiuqi Wang, Ze-Yang Zhou, Takuya Nihira, Yasuhiro Yamada, Tomohisa Kuzuyama, Haruo Seto, Jiro Nakayama, Akinori Suzuki, Hiromichi Nagasawa, Shohei Sakuda

Bioscience, biotechnology, and biochemistry   67 ( 9 )   2002 - 2005   2003.9

Identification of the lantibiotic nisin Q, a new natural nisin variant produced by Lactococcus lactis 61-14 isolated from a river in Japan. Reviewed International journal

Takeshi Zendo, Masanori Fukao, Kyoko Ueda, Tomoko Higuchi, Jiro Nakayama, Kenji Sonomoto

Bioscience, biotechnology, and biochemistry   67 ( 7 )   1616 - 9   2003.7

Effect of heterologous expression of molecular chaperone DnaK from Tetragenococcus halophilus on salinity adaptation of Escherichia coli Reviewed

Shinya Sugimoto, Jiro Nakayama, Daisuke Fukuda, Shino Sonezaki, Maki Watanabe, Amonlaya Tosukhowong, Kenji Sonomoto

Journal of Bioscience and Bioengineering   96 ( 2 )   129 - 133   2003.1

Identification of the lantibiotic nisin q, a new natural nisin variant produced by lactococcus lactis 61-14 isolated from a river in japan Reviewed

Takeshi Zendo, Masanori Fukao, Kyoko Ueda, Tomoko Higuchi, Jiro Nakayama, Kenji Sonomoto

Bioscience, Biotechnology and Biochemistry   67 ( 7 )   1616 - 1619   2003.1

Aminoacylation of the N-terminal cysteine is essential for Lol-dependent release of lipoproteins from membranes but does not depend on lipoprotein sorting signals. International journal

Ayumu Fukuda, Shin-Ichi Matsuyama, Takashi Hara, Jiro Nakayama, Hiromichi Nagasawa, Hajime Tokuda

The Journal of biological chemistry   277 ( 45 )   43512 - 43518   2002.11

Functional analysis of TraA, the sex pheromone receptor encoded by pPD1, in a promoter region essential for the mating response in Enterococcus faecalis. International journal

Takaaki Horii, Hiromichi Nagasawa, Jiro Nakayama

Journal of bacteriology   184 ( 22 )   6343 - 50   2002.11

Blasticidin A as an inhibitor of aflatoxin production by Aspergillus parasiticus Reviewed

S. Sakuda, M. Ono, H. Ikeda, T. Nakamura, Y. Inagaki, R. Kawachi, Jiro Nakayama, A. Suzuki, A. Isogai, H. Nagasawa

Journal of Antibiotics   53 ( 11 )   1265 - 1271   2000.1

Aflastatins: New streptomyces metabolites that inhibit aflatoxin biosynthesis

Shohei Sakuda, Makoto Ono, Hiroyuki Ikeda, Masaru Sakurada, Jiro Nakayama, Akinori Suzuki, Akira Isogai

Biologically Active Natural Products: Agrochemicals   185 - 200   1999.1

Structures and biosynthesis of aflastatins: Novel inhibitors of aflatoxin production by Aspergillus parasiticus

Makoto Ono, Shohei Sakuda, Hiroyuki Ikeda, Kazuo Furihata, Jiro Nakayama, Akinori Suzuki, Akira Isogai

Journal of Antibiotics   51 ( 11 )   1019 - 1028   1998.11

Molecular mechanism of peptide-specific pheromone signaling in Enterococcus faecalis: Functions of pheromone receptor TraA and pheromone- binding protein TraC encoded by plasmid pPD1 Reviewed

Jiro Nakayama, Yuuichiro Takanami, Takaaki Horii, Shohei Sakuda, Akinori Suzuki

Journal of Bacteriology   180 ( 3 )   449 - 456   1998.2

Structures and biosynthesis of aflastatins: novel inhibitors of aflatoxin production by Aspergillus parasiticus Reviewed

Makoto Ono, Shohei Sakuda, Hiroyuki Ikeda, Kazuo Furihata, Jiro Nakayama, Akinori Suzuki, Akira Isogai

Journal of Antibiotics   51 ( 11 )   1019 - 1028   1998.1

Structure of blasticidin A Reviewed

Shohei Sakuda, Ono Makoto, Hiroyuki Ikeda, Yasuhito Inagaki, Jiro Nakayama, Akinori Suzuki, Akira Isogai

Tetrahedron Letters   38 ( 42 )   7399 - 7402   1997.10

Genetic analysis of plasmid-specific pheromone signaling encoded by ppd1 in enterococcus faecalis Reviewed

Jiro Nakayama, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   61 ( 11 )   1796 - 1799   1997.1

Aflastatin A, a novel inhibitor of aflatoxin production of Aspergillus parasiticus, from Streptomyces Reviewed

Shohei Sakuda, Makoto Ono, Kazuo Furihata, Jiro Nakayama, Akinori Suzuki, Akira Isogai

Journal of the American Chemical Society   118 ( 33 )   7855 - 7856   1996.8

Isolation and Structure of staph-cAM373 Produced by Staphylococcus aureus That Induces Conjugal Transfer of Enterococcus faecalis Plasmid pAM373 Reviewed

Liro Nakayama, Shigeru Igarashi, Hiromichi Nagasawa, Don B. Clewell, Florence Y. An, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   60 ( 6 )   1038 - 1039   1996.1

Quantitative analysis for pheromone inhibitor and pheromone shutdown in Enterococcus faecalis. Reviewed

Jiro Nakayama, G. M. Dunny, D. B. Clewell, A. Suzuki

Developments in Biological Standardization   85   35 - 38   1995.1

Structural Analysis of New Syringopeptins by Tandem Mass Spectrometry Reviewed

Akira Isogai, Akira Isogai, Jiro Nakayama, Jiro Nakayama, Akinori Suzuki, Akihiko Kusai, Jon Y. Takemoto

Bioscience, Biotechnology and Biochemistry   59 ( 7 )   1374 - 1376   1995.1

Rotihibins, Novel Plant Growth Regulators from Streptomyces graminofaciens Reviewed

Naoyuki Fukuchi, Kazuo Furihata, Jiro Nakayama, Akira Isogai

Journal of Antibiotics   48 ( 9 )   1004 - 1010   1995.1

Structure and stereochemistry of three phytotoxins, syringomycin, syringotoxin and syringostatin, produced by Pseudomonas syringae pv. syringae Reviewed

Naoyuka Fukuchi, Akira Isogai, Jiro Nakayama, Seiji Takayama, Shuichi Yamashita, Kazuo Suyama, Jon Y. Takemoto, Akinori Suzuki

Journal of the Chemical Society, Perkin Transactions 1   ( 9 )   1149 - 1157   1992.12

Partial amino-acid sequence of ECP31, a carrot embryogenic-cell protein, and enhancement of its accumulation by abscisic acid in somatic embryos Reviewed

Tomohiro Kiyosue, Jiro Nakayama, Shinobu Satoh, Akira Isogai, Akinori Suzuki, Hiroshi Kamada, Hiroshi Harada

Planta   186 ( 3 )   337 - 342   1992.2

Isolation and structural elucidation of syringostatins, phytotoxins produced by pseudomonas syringae pv. syringae lilac isolate Reviewed

Naoyuki Fukuchi, Akira Isogai, Jiro Nakayama, Seiji Takayama, Shuichi Yamashita, Kazuo Suyama, Akinori Suzuki

Journal of the Chemical Society, Perkin Transactions 1   ( 7 )   875 - 880   1992.1

Structural Elucidation of Rotihibin B by Tandem Mass Spectrometry Reviewed

Naoyuki Fukuchi, Jiro Nakayama, Seiji Takayama, Akira Isogai, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   56 ( 7 )   1152 - 1153   1992.1

Structural Elucidation of Minor Components of Peptidyl Antibiotic P168s (Leucinostatins) by Tandem Mass Spectrometry Reviewed

Akira Isogai, Jiro Nakayama, Seiji Takayama, Akinori Suzuki, Akihiko Kusai

Bioscience, Biotechnology and Biochemistry   56 ( 7 )   1079 - 1085   1992.1

Expression of a Putative Precursor of Pheromone Biosynthesis Activating Neuropeptide-I (PBAN-I) of the Silkmoth, Bombyx mori, and Its Conversion to the Mature Peptide, PBAN-I Reviewed

Tsuyoshi Kawano, Hisato Kuniyoshi, Jiro Nakayama, Hiromichi Nagasawa, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   55 ( 7 )   1943 - 1945   1991.1

Amino acid sequence of pheromone-inducible surface protein in Enterococcus faecalis, that is encoded on the conjugative plasmid pPD1 Reviewed

Jiro Nakayama, Hiromich Nagasawa, Akira Isogai, Don B. Clewell, Akinori Suzuki

FEBS Letters   268 ( 1 )   245 - 248   1990.7

Structure of Syringotoxin B, a Phytotoxin Produced by Citrus Isolates of Pseudomonas syringae pv. syringae Reviewed

Naoyuki Fukuchi, Akira Isogai, Jiro Nakayama, Akinori Suzuki

Bioscience, Biotechnology and Biochemistry   54 ( 12 )   3377 - 3379   1990.1

Stucture of Demethylallosamidin as an Insect Chitinase Inhibitor Reviewed

Akira Isogai, Masahiro Sato, Shohei Sakuda, Jiro Nakayama, Akinori Suzuki

Agricultural and Biological Chemistry   53 ( 10 )   2825 - 2826   1989.10

Microbial Biofilms

（ Role： Joint author）

Springer  2014.9 

乳酸菌とビフィズス菌のサイエンス

山本憲二、中山二郎、他（ Role： Joint author）

京都大学学術出版会  2010.11 

Comprehensive Natural Products II: Chemistry and Biologym, Cell-to-cell communications among microorganisms

Sueharu Horinouchi, Kenji Ueda, Jiro Nakayama, Tsukasa Ikeda（ Role： Joint author）

Elsevier  2010.3 

Effect of garlic on lactic acid and bacteriocins production of bacteriocin-producing lactic acid bacteria associated in Nham (Thai fermented meat) during fermentation

Swetwiwathana A., Lotong N., Nakayama J., Sonomoto K.

52nd International Congress of Meat Science and Technology: Harnessing and exploiting global opportunities  2023.8    （ ISBN:9789086865796, 9789086860104 ）

食品免疫学辞典

中山二郎（ Role： Joint author）

朝倉書店  2021.11 

食品免疫学辞典

中山二郎（ Role： Joint author）

朝倉書店  2021.11 

Biotechnological Applications of Quorum Sensing Inhibitors

Basit Yousuf, Keika Adachi, Jiro Nakayama（ Role： Joint author）

Springer Nature  2018.6 

Quorum quenching strategy targeting gram-positive pathogenic bacteria

Ravindra Pal Singh, Said E. Desouky, Jiro Nakayama

Springer New York LLC  2016.1 

Quorum Sensing vs Quorum Quenching: A Battle with no end in Sight (Development of quorum-sensing inhibitors targeting the fsr system of enterococcus faecalis)

Ravindra Pal Singh, Jiro Nakayama（ Role： Joint author）

Springer  2015.1 

Quorum Sensing vs Quorum Quenching: A Battle with no end in Sight (Quorum-sensing systems in enterococci)

Ravindra Pal Singh, Jiro Nakayama（ Role： Joint author）

Springer  2015.1 

環境と微生物の事典

中山二郎、他（ Role： Joint author）

朝倉書店  2014.5 

世紀を越えるビフィズス菌の研究

上野川修一、山本憲二、中山二郎、他（ Role： Joint author）

(財）日本ビフィズス菌センター  2011.6 

腸内共生系のバイオサイエンス

上野川修一、清野宏、中山二郎、他（ Role： Joint author）

丸善出版  2011.5 

Cell-to-cell communications among microorganisms

Sueharu Horinouchi, Kenji Ueda, Jiro Nakayama, Tsukasa Ikeda

Elsevier Ltd  2010.3 

医科プロバイオティクス学

中山二郎、他（ Role： Joint author）

シナジー  2009.1 

プロバイオティクスとバイオジェニクス

中山二郎，田中重光，園元謙二（ Role： Joint author）

2005.1 

Aflastatins New streptomyces metabolites that inhibit aflatoxin biosynthesis

Shohei Sakuda, Makoto Ono, Hiroyuki Ikeda, Masaru Sakurada, Jiro Nakayama, Akinori Suzuki, Akira Isogai

CRC Press  1999.1 

Increase of non-communicable diseases in Asia is caused by change in diets and/or gut microbiota ? Invited International conference

Jiro Nakayama

The 13th Asian Conference on Lactic Acid Bacteria  2023.10 

Crisis and Remodeling of Asian Gut Microbiome Invited International conference

Jiro Nakayama

The 8th International Conference of Indonesian Society for Lactic Acid Bacteria and Gut Microbiota  2023.7 

炭素源の違いが合成腸内細菌叢に与える影響の解析

大石紗菜、中山二郎

第６０回化学関連支部合同大会  2023.7 

各種海藻多糖類が腸内細菌叢に及ぼす影響の比較解析

太田匡俊、三島梨子、上野幹憲、中山二郎

日本農芸化学会2023年度大会  2023.3 

直接作用型ウイルス剤(DAAs)による治療がC型肝炎患者の胆汁酸代謝に与える影響

中川大輔、井上貴子、田中靖人、中山二郎

日本農芸化学会2023年度大会  2023.3 

人間ドック受診者を対象とした腸内細菌叢と代謝疾患との関連性の解析

田村史織、篠田あかり、井上貴子、渡辺久剛、田中靖人、中山二郎

日本農芸化学会2023年度大会  2023.3 

Interaction of diet and gut microbiome in Asians and its effect on their health Invited

Jiro Nakayama

22nd International Union of Nutritional Sciences  2022.11 

Asian Microbiome Project to understand the current status of gut microbial community of Asians as an interface between foods and health Invited

Jiro Nakayama

The 12th Asian Conference on Lactic Acid Bacteria  2022.10 

Gut microbiome and metabolome of Asian population related to diet and health Invited

Jiro Nakayama

The 11th Asian Conference on Lactic Acid Bacteria  2021.11 

Comparison of gut microbiota between diabetic and non-diabetic obese Mongolian International conference

Akari SHINODA, Shirchin DEMBEREL, Riko MISHIMA, Dugersuren JAMYAN, Tsogtbaatar LKHAGVAJAV , Jiro NAKAYAMA

The 11th Asian Conference on Lactic Acid Bacteria  2021.11 

アジアの小学生児童の腸内細菌叢 Invited

中山二郎

第25回腸 内細菌学会学術集  2021.6 

各種ヒト胆汁酸による腸内芽胞形成細菌の発芽誘導と分離培養

鬼塚咲良，田中優，中山二郎

第25回腸 内細菌学会学術集会  2021.6 

アジアの小学生児童の腸内細菌叢 Invited

中山二郎

第25回腸 内細菌学会学術集会  2021.6 

腸内環境および免疫機能に及ぼすあまおう乳酸菌およびフコイダンの摂食効果

篠田あかり，朴俊夏，中野勇人，柴崎哲哉， 宮﨑義之，中山二郎

日本農芸化学会2021年度大会  2021.3 

日本人とインドネシア人の乳幼児の腸内メタゲノム比較解析

清野峻彦，堀野美里，田中優，山田拓司，林哲也， 後藤恭宏，加藤聖子，實藤雅文，諸隈誠一，小川昌宣， Endang Rahayu，中山 二郎

日本農芸化学会2021年度大会  2021.3 

The succession of gut mycobiota in Japanese infants at first 3 years of life International conference

Riko Mishima, Masafumi Sanefuji, Seiichi Morokuma, Masaru Tanaka, Masanobu Ogawa, Kiyoko Kato, Jiro Nakayama

International Union of Microbiological Societies 2020  2020.10 

アジア人の食と腸内フローラと生活習慣病 Invited

中山二郎

Visionary 農芸化学100 シンポジウム 食・腸内細菌・健康研究領域 第3回シンポジウム「健康長寿社会に向けての腸内細菌科学の新展開  2021.9 

生後1年間における乳幼児の腸内真菌叢形成と出産・育児環境因子の関連性解析

#三島 梨子、@實藤 雅文、@諸隈 誠一、#田中 優、百田 理恵、@園元 謙二、@小川 昌宣、@加藤 聖子、@中山 二郎

日本農芸化学会2019年度大会  2019.3 

環状ペプチドクォルモンを介する腸内細菌と宿主のクロストークの可能性 Invited

中山二郎

日本農芸化学会2019年度大会  2019.3 

Maturation of the infant gut microbiota community and bile acids metabolism over three years in healthy Japanese infants International conference

7th Beneficial Microbes Conference  2018.11 

Signatures imprinted in gut microbiome of Asians: a comparative metagenomic study of children in East and South-East Asia International conference

#Misato Horino, #M. Tanaka, #A. Uchikawa, R. Momoda, @K. Sonomoto, Y. Ogura, A. Toyoda, T. Yamada, K. Kurokawa, @T. Hayashi, @J.Nakayama

7th Beneficial Microbes Conference  2018.11 

日本人成人における腸内細菌叢と食事の関連性の解析

内川彩夏，田中優, 余田美沙子，中山二郎, 池田温子, 河口礼佳, 十倉充範

日本農芸化学会 関西・中四国・西日本支部2017年度合同大阪大会  2017.9 

Urbanization of Thai diets and its impacts to children gut microbiota and metabolites, The International Conference on Beneficial Microbes International conference

#J. Kisuse, #M. Tanaka, #P. Therdtatha, R. Momoda, O. La-ongkham, M. Nakphaichit, S. Nitisinpraser, S. Fukuda, @K. Sonomoto, @J. Nakayama

ICOBM2018  2018.8 

アジア各国の腸内細菌叢の有する遺伝子機能に関する研究

堀野美里、田中優、内川彩夏、百田理恵、園元謙二、小椋義俊、豊田敦、山田拓司、黒川顕、林哲也、中山二郎

日本乳酸菌学会2018年度大会  2018.7 

In vitro培養モデルを利用したヒト腸管における短鎖脂肪酸生産に関わる主要細菌群の選出

冬野憂介、安達 桂香、田中優、園元 謙二、中山 二郎

日本乳酸菌学会2018年度大会  2018.7 

腸内細菌叢研究から見た日本人の食生活と健康：Asian Microbiome Projectの研究成果から Invited

中山二郎、Yuan-Kun Lee

第72回日本栄養・食糧学会大会  2018.5 

日本人健常人の腸内細菌叢における胆汁酸代謝に関する研

余田美沙子、田中優、内川彩夏、百田理恵、池田温子、河口礼佳、園元謙二、十倉充範、中山二郎

日本農芸化学会2018年度大会  2018.3 

日本人乳幼児の生後3年間の腸内フローラの形成・成熟化と胆汁酸代謝の関連性解析

田中優、實藤雅文、諸隈誠一、余田美沙子、百田理恵、園元謙二、加藤聖子、中山二郎

日本農芸化学会2018年度大会  2018.3 

日本人健常成人の食と腸内細菌叢における短鎖脂肪酸の生産パターン

内川彩夏、田中優、余田美沙子、百田理恵、園元謙二、中山二郎、池田温子、河口礼佳、十倉充範

日本農芸化学会2018年度大会  2018.3 

アジア人の腸内フローラとビフィズス菌 Invited

中山二郎

腸内細菌と健康ービフィズス菌研究の新展開  2018.1 

アジアマイクロビオームプロジェクト：アジア人の食と健康のインターフェースとしての腸内フローラの理解に向けて Invited

中山二郎

第26回腸内フローラシンポジウム  2017.10 

Metabolic-linked pH-drop quenches VirSR quorum sensing in Clostridium perfringens International conference

Keika Adachi, Jiro Nakayama.

6th ASM Cell-Cell communication in Bacteria  2017.10 

Ecology of gut microbiota in Japanese children - possible link with pre- and probiotics research Invited International conference

Jiro Nakayama

6th Beneficial Microbes Conference  2017.10 

Clostridium perfringensの毒素生産制御に関わる内在性クオラムクエンチングの解析

安達桂香、Ravindra Pal Singh、園元謙二、中山二郎

第69回日本生物工学会年次大会  2017.9 

Clostridium perfringensの代謝同調的な内在性クオラムクエンチング機構の実態解明

安達桂香、Ravindra Pal Singh、大谷郁、園元謙二、中山二郎

環境微生物系学会合同大会2017  2017.8 

Changing dietary habit is changing Asians gut microbiota Invited International conference

Jiro Nakayama

15th International Congress of Bacteriology and Applied Microbiology  2017.7 

健常成人における胆汁酸プロファイルと腸内細菌叢の関連性の解析

余田美沙子、田中優、内川彩夏、本田倫子、百田理恵、池田温子、河口礼佳、園元謙二、十倉充範、中山二郎

日本乳酸菌学会2017年度大会  2017.7 

Clostridium perfringensの内在性クオラムクエンチング―代謝同調的pH低下によるクオラムセンシング機構の抑制―

安達桂香、神川美樹、Ravindra Pal Singh、大谷郁、園元謙二、中山二郎

日本農芸化学会  2017.3 

Clostridiales目細菌ゲノムにコードされるagr様クオラムセンシング系自己誘導ペプチドのLC-MS/MS検出系の確率

中山二郎、神川美樹、安達桂香、大久保謙一、大谷郁、岡健太郎、園元謙二

日本農芸化学会  2017.3 

腸内細菌叢研究の概論 Invited

中山二郎

日本アレルギー学会イブニングシンポジウム  2016.12 

ヒト腸内細菌叢のダイナミズムとダイバーシティー Invited

中山二郎

日本乳酸菌学会秋期セミナー  2016.12 

Changing dietary habit is changing Asian gut microbiota Invited International conference

Jiro Nakayama

5th Beneficial Microbes Conference  2016.10 

アジア人の腸内細菌叢 Invited

中山二郎

Visonary農芸化学100シンポジウム  2016.10 

アジア人の食と腸内細菌叢の関連性 Invited

中山二郎、本田倫子、Kisuse Juma、百田理恵、田中優、園元謙二、Lee Yuan-Kun

日本生物工学会  2016.9 

Clostridium butyricum MIYAIRI 588が産生するオートインデューサー様ペプチドの同定

神川美樹、庄島あかね、大久保謙一、松藤貴久、Ravindra Pal Siingh,　大谷郁、岡健太郎、高橋志達、園元謙二、中山二郎

第52回化学関連支部合同九州大会  2015.6 

新生児の生後１年間の腸内細菌叢変化と食物アレルギー発症の関連性の解析

田中優、東佳那子、山本麻寿紗、本田倫子、百田理恵、清原千賀子、園元謙二、鷲尾昌一、中山二郎

第20回腸内細菌学会  2016.6 

Development of quorum quenching peptides targeting VirR/VirS system of Clostridium perfringens International conference

Ravindra Pal Singh, Kenich Okubo, Kenji Sonomoto, Jiro Nakayama

6th Congress of European Microbiologists  2015.6 

Clostridium perfringensの毒素産生を制御するクオラムクエンチングの機構の解明

安達桂香、大谷郁、河野通生、ラビンドラパルシン、園元謙二、中山二郎

日本農芸化学会2016年度大会  2016.3 

食物アレルギー発症児と非発症児の乳幼児期における腸内細菌叢の比較解析

田中優、東佳那子、山本麻寿紗、本田倫子、百田理恵、清原千賀子、園元謙二、鷲尾昌一、中山二郎

日本農芸化学会2016年度大会  2016.3 

フィリピンの子どもの腸内細菌叢：食との関連性

山本麻寿紗、本田倫子、田中優、百田理恵、Ladie Palermo, Jullie Tan, Yuan Kun Lee, 園元謙二、中山二郎

第22回日本生物工学会九州支部宮崎大会  2015.12 

Clostridium perfringensの毒素産生を制御するクオラムクエンチングに関する研究

安達桂香、Ravindra Pal Singh,大谷郁、河野通生、園元謙二、中山二郎

第22回日本生物工学会九州支部宮崎大会  2015.12 

Age-related changes and their food consumption affecting gut microbiota of healthy Thai subjects Invited International conference

Sunee Nitisinprasert, Orawan La-ongkam, Supatjaree Ruengsomwong, Massalin Nakphaichit, Bhusita Wanissorn, Jiro Nakayama

2015.10 

新生児期における腸内細菌叢に影響を与える要因の網羅的解析

本田倫子、實藤雅文、諸隈誠一、山本麻寿紗、田中優、百田理恵、高木愛子、佐藤匡夫、月森清巳、加藤聖子、原寿郎、中山二郎

第67回日本生物工学会  2015.10 

フィリピン都市部と農村部に住む児童の腸内細菌叢の比較

山本麻寿紗、本田倫子、田中優、百田理恵、Ladie Palermo, Jullie Tan, Yuan Kun Lee, 園元謙二、中山二郎

2015年度日本農芸化学会中四国・西日本支部合同大会  2015.9 

Digging into our gut microbial community by NGS Invited International conference

Jiro Nakayama

2nd Asian Fermented Foods: Probiotic: the potential ingredients for health products  2015.8 

What is microbiota, microbiome and their analysis ? Invited International conference

Jiro Nakayama

The 8th Asian Conference on Lactic Acid Bacteria  2015.7 

アジア人の食と腸内細菌と健康に関するマルチコホート研究 Invited

中山二郎

第19回腸内細菌学会  2015.6 

Asian Microbiome Project:アジア人の食と腸内フローラと健康に関する調査研究 Invited

中山二郎、渡辺幸一、Yuan-Kun Lee

日本農芸化学会2014年度大会  2014.3 

放線菌の生産する環状デプシペプチドによるクオラムセンシング阻害活性

庄島あかね, 園元謙二, 中山二郎, Said E Desouky, 大久保謙一

日本農芸化学会2014年度大会  2014.3 

アジア人の腸内フローラに見られる２つのエンテロタイプと地域特異性

東佳那子、Jiahui Jiang, 渡辺幸一、Shirchin Demberel, Sunee Nitisinprasert, Yongha Park, Endang S, Rahayum, Fa-Zheng Ren, Ying-Chieh Tsai, 園元謙二、Yuan-Kun Lee, 中山二郎

日本農芸化学会2014年度大会  2014.3 

微生物二次代謝産物を対象としたグラム陽性病原細菌のクオラムセンシング阻害物質の探索

松藤貴久, 園元謙二, 中山二郎, Said E Desouky

第20回生物工学会九州支部佐賀大会  2013.12 

Diversity in gut bacterial composition and their 16S rRNA gene sequences among Asian children

Jihaui Jiang, Kenji Sonomoto, Jiro Nakayama

2013.9 

グラム陽性日和見感染菌のクオラムセンシング阻害剤のスクリーニングと構造解析

庄島あかね, 園元謙二, 中山二郎, 松藤貴久

第50回科学関連合同支部九州大会  2013.7 

アジア５ヶ国児童の腸内細菌叢解析

第17回腸内細菌学会  2013.6 

Phase I study of Asian Microbiome Project: Discovery of intestinal microbiota in Asian youngsters profiled bu 16S rRNA gene pyrosequencing

Jiang J, Nakayama J, Watanabe K, Sakamoto N, Matsuda K, Kurakawa T, Tsuji H, Ren FZ, Nitisinprasert S, Rahayu ES, Liao CC, Tsai YC, Lee YK

2013.3 

腸内細菌と健康：ゆりかごから墓場まで Invited

中山二郎

日本微生物連盟フォーラム「驚きの微生物たち」  2013.1 

腸球菌のクオラムセンシング阻害剤ZBzl-YAA5911の創製とその抗感染症剤としての効果検証

中山二郎，横畑綾治，松藤貴久，鈴木崇，永田宏次，園元謙二

第35回日本分子生物学会  2012.12 

長期熟成糠床に生息する2つの乳酸桿菌のゲノム・生理特性解析

加唐圭太、阪本直茂、森一樹、田代康介、園元謙二、中山二郎

第19回九州支部大分大会  2012.6 

454 Pyrosequencing study on the basal microbiota of healthy Asian youngsters International conference

Jiang J, Nakayama J, Watanabe K, Sakamoto N, Matsuda K, Kurakawa T, Tsuji H, Ren FZ, Nitisinprasert S, Rahayu ES, Liao CC, Tsai YC, Lee YK

3rd Asain Symposium on Lactic Acid Bacteria  2012.5 

分子疫学研究による乳幼児腸内細菌叢とアレルギーの関連性の解析

田中 重光、SONGJINDA, Prapa、立山 敦、坪内 美樹、清原 千香子、白川 太郎、中山 二郎、園元 謙二

日本農芸化学会  2006.3 

腸球菌のfsr系を制御する環状ペプチドGBAPの構造活性相関

西口 賢三、中山 二郎、園元 謙二

日本農芸化学会  2006.3 

リステリア属細菌のagr様遺伝子群にコードされる環状ペプチドクォルモンの構造決定

朱雀 奈津子、西口 賢三、善藤 威史、中山 二郎、園元 謙二

日本農芸化学会  2008.3 

腸球菌のクォーラムセンシングを制御する環状ペプチドクォルモン（GBAP）の2つの芳香族アミノ酸は受容体への結合に関与する

西口 賢三、中山 二郎1、永田 宏次、田之倉 優、園元 謙二

日本農芸化学会  2008.3 

糸状菌二次代謝産物を対象とした腸球菌のクォーラムセンシング阻害物質の探索

上村 結美、中山 二郎、五十嵐 康弘、西口 賢三、園元 謙二

日本農芸化学会  2008.3 

乳幼児における腸内細菌叢形成とアレルギー発症に関する研究

田中 重光、中山 二郎、SONGJINDA, Prapa、立山 敦、小林 貴子、清原 千香子、園元 謙二

日本農芸化学会  2008.3 

AN OVERVIEW OF LACTOBACILLUS REUTERI KUB-AC5 AS AN ANTIMICROBIAL SUBSTANCE PRODUCER AND PROBIOTIC Invited International conference

Sunee Nitisinprasert, Massalin Nakphaichit, Nuntaporn Pungsungvorn, Jiraporn Tangthong, Arpa Suwatwattanakul, Jiro Nakayama, Kenji Sonomoto

International Union of Microbiological Societies 2011 Congress  2011.9 

ASIAN MICROBIOME PROJECT Invited International conference

Yuan Kun Lee, Jiro Nakayama, Fazheng Ren, Sunee Nitisinprasert, Endang Rahayu, Raha Abdul Rahim, Chii Cherng Liao, Koichi Watanabe, Ying Chieh Tsai

International Union of Microbiological Societies 2011 Congress  2011.9 

COMMUNITY STRUCTURE AND IMMUNE FUNCTION OF DEVELOPMENTAL GI TRACT MICROBIOTA IN INFANTS Invited International conference

Jiro Nakayama

International Union of Microbiological Societies 2011 Congress  2011.9 

COMMUNITY STRUCTURE AND IMMUNE FUNCTION OF DEVELOPMENTAL GI TRACT MICROBIOTA IN INFANTS Invited International conference

Jiro Nakayama

International Union of Microbiological Societies 2011 Congress  2011.9 

Discovery and Development of Inhibitors Targeting Cyclic　Peptide-mediated Quorum Sensing in Gram-positive　Pathogens Invited International conference

2011.11 

Asian Microbiome Project: A pilot study on the basal microbiota profile of healthy Asian youngsters International conference

Nakayama J, Watanabe K, Sakamoto N, Jiang J, Matsuda K, Kurakawa T, Tsuji H, Ren FZ, Nitisinprasert S, Rahayu ES, Liao CC, Tsai YC, Lee YK

International Human Microbiome Conference  2012.3 

日本人成人腸内細菌叢の７クラスターの短鎖脂肪酸・胆汁酸代謝機能性と食生活習慣との関係性

田中優、余田美沙子、内川彩夏、百田理恵、園元謙二、池田 温子、河口礼佳、十倉充範、亀山恵司、中山二郎

日本乳酸菌学会  2019.7 

Features and signatures in Asian microbiome: Crisis or adaptation ? Invited International conference

Jiro Nakayama

The 10th Asian Conference on Lactic Acid Bacteria  2019.8 

アジア人の食習慣と腸内細菌叢と健康に関する研究 Invited

中山二郎

第71回日本生物工学会大会  2019.9 

出生・育児環境が乳幼児期の腸内真菌叢形成に及ぼす影響

三島梨子，實藤雅文，諸隈誠一，田中優，園元謙二，小川昌宣，加藤聖子, 中山二郎

日本農芸化学会2019年度西日本・中四国支部合同沖縄大会  2019.11 

Association of diets with intestinal microbiome in Asians Invited International conference

Jiro Nakayama

The 7th Iternational Conference on Food Factors  2019.12 

腸内細菌と口腔内細菌の胆汁酸耐性

船津結妃，田中 優，鬼塚咲良，中山二郎

第26回日本生物工学会九州支部長崎大会  2019.12 

胆汁酸の発芽誘導活性を利用した腸内芽胞形成細菌の分離と同定

田中 優，鬼塚 咲良，船津 結妃，中山 二郎

第93回日本細菌学会総会  2020.2 

Difference of Gut Microbial Metabolism among Indonesian Obese, Type 2 Diabetic, and Healthy Groups

Yayi Song, Phatthanaphong Therdtatha, Masaru Tanaka, Mariyatun Mariyatun, Miisaroh Almunifah, Nancy Eka Putri Manurung, Siska Indriarshi, Yuan-kun, Lee, Endang Sutriswati Rahayu, Jiro Nakayama

2020.3 

Difference of Gut Microbial Community in Indonesian Obese, Type 2 Diabetic, and Healthy Groups

Phatthanaphong Therdtatha, Masaru Tanaka, Mariyatun Mariyatun, Miisaroh Almunifah, Nancy Eka Putri Manurung, Siska Indriarshi, Yuan-kun, Lee, Endang Sutriswati Rahayu, Jiro Nakayama

2020.3 

モンゴル人の腸内フローラと生活習慣病との関係

篠田あかり、デンベレルシルチン、三島梨子、田中優、堀野美里、ジャムヤンドゴースレン, ラハクバジャウツォクトバートル、中山二郎

日本農芸化学会２０２０年度大会  2020.3 

ヒト腸内芽胞形成細菌の各種胆汁酸による発芽誘導と分離培養

鬼塚咲良，田中　優，中山二郎

日本農芸化学会２０２０年度大会  2020.3 

腸内フローラにおける胆汁酸代謝と健康と疾病について俯瞰する Invited

中山二郎、田中優、船津結妃

日本農芸化学会２０２０年度大会  2020.3 

Peptide-mediated cell-cell communication in Gram-positive bacteria Invited International conference

Nakayama, J.

The XVth international symposium on gnotobiology  2005.7 

複合型糖鎖を資化するBarnesiella属腸内細菌の解析

土井佳奈子二郎，樋口裕次郎，竹川 薫，中山二郎

第2９回 日本生物工学会九州支部 大分大会  2023.12