Faculty Profiles - KOKITA TOMOYUKI

Information

写真a

KOKITA TOMOYUKI

Organization

Faculty of Agriculture Department of Bioresource Sciences Professor
Graduate School of Bioresource and Bioenvironmental Sciences Department of Bioresource Sciences（Concurrent）
School of Agriculture Department of Bioresource and Bioenvironment（Concurrent）

Contact information

Tel

0928024804

Profile

As a faculty member in charge of Fisheries Science and Marine Bioscience, I am engaged in education and research in fish ecology, genetics, and evolution.

Homepage

http://www.agr.kyushu-u.ac.jp/lab/fisheries_biol/index.html

External link

Research Areas

Life Science / Aquatic life science
Life Science / Aquatic bioproduction science
Life Science / Ecology and environment
Life Science / Biodiversity and systematics
Life Science / Evolutionary biology
Environmental Science/Agriculture Science / Conservation of biological resources

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Degree

Ph.D.

Research History

2003年1月-2003年9月　　（財）熱帯海洋生態研究振興財団　研究員 2000年1月-2002年12月　　日本学術振興会特別研究員（PD）

2003年1月-2003年9月　　（財）熱帯海洋生態研究振興財団　研究員 2000年1月-2002年12月　　日本学術振興会特別研究員（PD）
2012年4月-2021年9月　　福井県立大学海洋生物資源学部准教授 2009年4月-2012年3月　　福井県立大学海洋生物資源学部講師 2008年4月-2009年3月　　福井県立大学生物資源学部講師 2007年4月-2008年3月　　福井県立大学生物資源学部助教 2003年10月-2007年3月　　福井県立大学生物資源学部助手

Education

Kyushu University 農学研究科（博士後期課程）

1996.4 - 1999.3
Tohoku University 農学研究科（博士前期課程）

1994.4 - 1996.3
Tohoku University 農学部

1990.4 - 1994.3

Research Interests・Research Keywords

Research theme： Ecological genomics　of fishes

Keyword： Ecological Genetics、Behavioral Genetics、Evolutionary Ecology、Behavioral Ecology、Ichthyology

Research period： 2021.10

Awards

奨励賞

2008.9 日本魚類学会

Papers

Artificial interspecific hybridization of the two distant anemonefish species and phenotypic characterization of the F1 hybrid Reviewed International journal

Haruka Yoshida, Tomoyuki Kokita

Ichthyological Research 72 ( 1 ) 186 - 191 2025.1

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Authorship：Last author,　Corresponding author Language：English Publishing type：Research paper (scientific journal)

DOI： doi.org/10.1007/s10228-024-00956-2
Phenotypic and Genomic Signatures of Latitudinal Local Adaptation Along With Prevailing Ocean Current in a Coastal Goby Reviewed

Shotaro Hirase, Atsushi J. Nagano, Kenji Nohara, Kiyoshi Kikuchi, Tomoyuki Kokita

Molecular Ecology 34 ( 2 ) e17599 2025.1

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Authorship：Last author,　Corresponding author Language：English Publishing type：Research paper (scientific journal)

DOI： https://doi.org/10.1111/mec.17599
QTL-Based Evidence of Population Genetic Divergence in Male Territorial Aggressiveness of the Japanese Freshwater Threespine Stickleback Reviewed

Haruka Yamazaki, Seiichi Mori, Osamu Kishida, Atsushi J. Nagano, Tomoyuki Kokita

Ecology and Evolution 15 ( 1 ) e70795 2025.1

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Authorship：Last author,　Corresponding author Language：English Publishing type：Research paper (scientific journal)

DOI： https://doi.org/10.1002/ece3.70795
Plate reduction in southern Japanese freshwater populations of threespine stickleback (Gasterosteus aculeatus) Reviewed International journal

Hiyu Kanbe, Takuya K. Hosoki, Tomoyuki Kokita, Seiichi Mori, Jun Kitano

Ecology and Evolution 2023.5

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Language：English Publishing type：Research paper (scientific journal)

DOI： https://doi.org/10.1002/ece3.10077
Gudgeon fish with and without genetically determined countershading coexist in heterogeneous littoral environments of an ancient lake Reviewed International journal

Tomoyuki Kokita, Kohtaro Ueno, Yo Y. Yamasaki, Masanari Matsuda, Ryoichi Tabata, Atsushi J. Nagano, Tappei Mishina, Katsutoshi Watanabe

Ecology and Evolution 11 ( 19 ) 13283 - 13294 2021.10

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Language：English Publishing type：Research paper (scientific journal)

DOI： 10.1002/ece3.8050
Multiple waves of freshwater colonization of the three-spined stickleback in the Japanese Archipelago Reviewed

Ryo Kakioka, Seiichi Mori, Tomoyuki Kokita, Takuya K. Hosoki, Atsushi J. Nagano, Asano Ishikawa, Manabu Kume, Atsushi Toyoda, Jun Kitano

BMC Evolutionary Biology 20 ( 1 ) 2020.12

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<title>Abstract</title>
<sec>
<title>Background</title>
The three-spined stickleback (<italic>Gasterosteus aculeatus</italic>) is a remarkable system to study the genetic mechanisms underlying parallel evolution during the transition from marine to freshwater habitats. Although the majority of previous studies on the parallel evolution of sticklebacks have mainly focused on postglacial freshwater populations in the Pacific Northwest of North America and northern Europe, we recently use Japanese stickleback populations for investigating shared and unique features of adaptation and speciation between geographically distant populations. However, we currently lack a comprehensive phylogeny of the Japanese three-spined sticklebacks, despite the fact that a good phylogeny is essential for any evolutionary and ecological studies. Here, we conducted a phylogenomic analysis of the three-spined stickleback in the Japanese Archipelago.

</sec>
<sec>
<title>Results</title>
We found that freshwater colonization occurred in multiple waves, each of which may reflect different interglacial isolations. Some of the oldest freshwater populations from the central regions of the mainland of Japan (hariyo populations) were estimated to colonize freshwater approximately 170,000 years ago. The next wave of colonization likely occurred approximately 100,000 years ago. The inferred origins of several human-introduced populations showed that introduction occurred mainly from nearby habitats. We also found a new habitat of the three-spined stickleback sympatric with the Japan Sea stickleback (<italic>Gasterosteus nipponicus</italic>).

</sec>
<sec>
<title>Conclusions</title>
These Japanese stickleback systems differ from those in the Pacific Northwest of North America and northern Europe in terms of divergence time and history. Stickleback populations in the Japanese Archipelago offer valuable opportunities to study diverse evolutionary processes in historical and contemporary timescales.

</sec>

DOI： 10.1186/s12862-020-01713-5
Nearly year-round reproduction among individuals of a Japanese freshwater threespine stickleback population Reviewed

Akihiko Yamamoto, Seiichi Mori, Yukiharu Hasegawa, Tomoyuki Kokita

Ichthyological Research 67 ( 4 ) 533 - 540 2020.11

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DOI： 10.1007/s10228-020-00740-y
Multiple waves of freshwater colonization of the three-spined stickleback in the Japanese Archipelago Reviewed

Ryo Kakioka, Seiichi Mori, Tomoyuki Kokita, Takuya K. Hosoki, Atsushi J. Nagano, Asano Ishikawa, Manabu Kume, Atsushi Toyoda, Jun Kitano

BMC Evolutionary Biology 20 143 2020.11

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Language：Others Publishing type：Research paper (scientific journal)

<title>Abstract</title>
<sec>
<title>Background</title>
The three-spined stickleback (<italic>Gasterosteus aculeatus</italic>) is a remarkable system to study the genetic mechanisms underlying parallel evolution during the transition from marine to freshwater habitats. Although the majority of previous studies on the parallel evolution of sticklebacks have mainly focused on postglacial freshwater populations in the Pacific Northwest of North America and northern Europe, we recently use Japanese stickleback populations for investigating shared and unique features of adaptation and speciation between geographically distant populations. However, we currently lack a comprehensive phylogeny of the Japanese three-spined sticklebacks, despite the fact that a good phylogeny is essential for any evolutionary and ecological studies. Here, we conducted a phylogenomic analysis of the three-spined stickleback in the Japanese Archipelago.

</sec>
<sec>
<title>Results</title>
We found that freshwater colonization occurred in multiple waves, each of which may reflect different interglacial isolations. Some of the oldest freshwater populations from the central regions of the mainland of Japan (hariyo populations) were estimated to colonize freshwater approximately 170,000 years ago. The next wave of colonization likely occurred approximately 100,000 years ago. The inferred origins of several human-introduced populations showed that introduction occurred mainly from nearby habitats. We also found a new habitat of the three-spined stickleback sympatric with the Japan Sea stickleback (<italic>Gasterosteus nipponicus</italic>).

</sec>
<sec>
<title>Conclusions</title>
These Japanese stickleback systems differ from those in the Pacific Northwest of North America and northern Europe in terms of divergence time and history. Stickleback populations in the Japanese Archipelago offer valuable opportunities to study diverse evolutionary processes in historical and contemporary timescales.

</sec>

DOI： 10.1186/s12862-020-01713-5
Accumulation of Deleterious Mutations in Landlocked Threespine Stickleback Populations Reviewed

Kohta Yoshida, Mark Ravinet, Takashi Makino, Atsushi Toyoda, Tomoyuki Kokita, Seiichi Mori, Jun Kitano

Genome Biology and Evolution 12 ( 4 ) 479 - 492 2020.4

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<title>Abstract</title>Colonization of new habitats often reduces population sizes and may result in the accumulation of deleterious mutations by genetic drift. Compared with the genomic basis for adaptation to new environments, genome-wide analysis of deleterious mutations in isolated populations remains limited. In the present study, we investigated the accumulation of deleterious mutations in five endangered freshwater populations of threespine stickleback (Gasterosteus aculeatus) in the central part of the mainland of Japan. Using whole-genome resequencing data, we first conducted phylogenomic analysis and confirmed at least two independent freshwater colonization events in the central mainland from ancestral marine ecotypes. Next, analyses of single nucleotide polymorphisms showed a substantial reduction of heterozygosity in freshwater populations compared with marine populations. Reduction in heterozygosity was more apparent at the center of each chromosome than the peripheries and on X chromosomes compared with autosomes. Third, bioinformatic analysis of deleterious mutations showed increased accumulation of putatively deleterious mutations in the landlocked freshwater populations compared with marine populations. For the majority of populations examined, the frequencies of putatively deleterious mutations were higher on X chromosomes than on autosomes. The interpopulation comparison indicated that the majority of putatively deleterious mutations may have accumulated independently. Thus, whole-genome resequencing of endangered populations can help to estimate the accumulation of deleterious mutations and inform us of which populations are the most severely endangered. Furthermore, analysis of variation among chromosomes can give insights into whether any particular chromosomes are likely to accumulate deleterious mutations.

DOI： 10.1093/gbe/evaa065
Genomic and phenotypic consequences of two independent secondary contact zones between allopatric lineages of the anadromous ice goby Leucopsarion petersii Reviewed

Shotaro Hirase, Tomoyuki Kokita, Atsushi J. Nagano, Kiyoshi Kikuchi

Heredity 124 ( 1 ) 223 - 235 2020.1

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DOI： 10.1038/s41437-019-0239-6
Geographical distribution and population genetic structure of the gobiid fish Gymnogobius sp. 2, formerly known as Gymnogobius cf. castaneus “Toyama-endemic” Reviewed

Shunsuke Chiba, Takanori Kawasaki, Kunihiko Yamamoto, Satoru N. Chiba, Kouichi Shibukawa, Takahiko Mukai, Tomoyuki Kokita

Ichthyological Research 67 ( 1 ) 212 - 220 2020.1

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DOI： 10.1007/s10228-019-00708-7
A key metabolic gene for recurrent freshwater colonization and radiation in fishes Reviewed

Asano Ishikawa, Naoki Kabeya, Koki Ikeya, Ryo Kakioka, Jennifer N. Cech, Naoki Osada, Miguel C. Leal, Jun Inoue, Manabu Kume, Atsushi Toyoda, Ayumi Tezuka, Atsushi J. Nagano, Yo Y. Yamasaki, Yuto Suzuki, Tomoyuki Kokita, Hiroshi Takahashi, Kay Lucek, David Marques, Yusuke Takehana, Kiyoshi Naruse, Seiichi Mori, Oscar Monroig, Nemiah Ladd, Carsten J. Schubert, Blake Matthews, Catherine L. Peichel, Ole Seehausen, Goro Yoshizaki, Jun Kitano

Science 364 ( 6443 ) 886 - 889 2019.5

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DOI： 10.1126/science.aau5656
Armour plate diversity in Japanese freshwater Threespine stickleback (Gasterosteus aculeatus) Reviewed

Yo Y. Yamasaki, Seiichi Mori, Tomoyuki Kokita, Jun Kitano

Evolutionary Ecology Research 20 ( 1 ) 51 - 67 2019.1

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Evolution of gigantism and size-based female mate choice in ice goby (Leucopsarion petersii) populations in a semi-enclosed sea basin Reviewed

Tomoyuki Kokita, Sayaka Takahashi, Masaki Kinoshita

Biological Journal of the Linnean Society 120 ( 3 ) 563 - 577 2017.3

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DOI： 10.1111/bij.12900
Genomic architecture of habitat-related divergence and signature of directional selection in the body shapes of Gnathopogon fishes Reviewed

Ryo Kakioka, Tomoyuki Kokita, Hiroki Kumada, Katsutoshi Watanabe, Noboru Okuda

Molecular Ecology 24 ( 16 ) 4159 - 4174 2015.8

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DOI： 10.1111/mec.13309
Population structure and cryptic replacement of local populations in the endangered bitterling Acheilognathus cyanostigma Reviewed

Junya Kitazima, Masanari Matsuda, Seiichi Mori, Tomoyuki Kokita, Katsutoshi Watanabe

Ichthyological Research 62 ( 2 ) 122 - 130 2015.1

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DOI： 10.1007/s10228-014-0412-0
The origins of limnetic forms and cryptic divergence in Gnathopogon fishes (Cyprinidae) in Japan Reviewed

Ryo Kakioka, Tomoyuki Kokita, Ryoichi Tabata, Seiichi Mori, Katsutoshi Watanabe

Environmental Biology of Fishes 96 ( 5 ) 631 - 644 2013.5

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DOI： 10.1007/s10641-012-0054-x
Molecular signatures of lineage-specific adaptive evolution in a unique sea basin: the example of an anadromous goby Leucopsarion petersii

Tomoyuki Kokita, Sayaka Takahashi, Hiroki Kumada

Molecular Ecology 22 ( 5 ) 1341 - 1355 2013.3

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DOI： 10.1111/mec.12184
A RAD-based linkage map and comparative genomics in the gudgeons (genus Gnathopogon, Cyprinidae) Reviewed

Ryo Kakioka, Tomoyuki Kokita, Hiroki Kumada, Katsutoshi Watanabe, Noboru Okuda

BMC Genomics 14 32 2013.1

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DOI： 10.1186/1471-2164-14-32
Phylogeography and historical demography of the anadromous fish Leucopsarion petersii in relation to geological history and oceanography around the Japanese Archipelago Reviewed

TOMOYUKI KOKITA, KENJI NOHARA

Molecular Ecology 20 ( 1 ) 143 - 164 2011.1

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DOI： 10.1111/j.1365-294x.2010.04920.x
Heterochronic differences in fin development between latitudinal populations of the medaka Oryzias latipes (Actinopterygii: Adrianichthyidae) Reviewed

MAIKO KAWAJIRI, TOMOYUKI KOKITA, KAZUNORI YAMAHIRA

Biological Journal of the Linnean Society 97 ( 3 ) 571 - 580 2009.6

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DOI： 10.1111/j.1095-8312.2009.01233.x
Isolation and characterization of 11 polymorphic microsatellite loci in the whitegirdled goby (Pterogobius zonoleucus) and cross-species amplification in the serpentine goby (P. elapoides) Reviewed

K. NOHARA, T. KOKITA, O. TOMINAGA, T. SEIKAI

Molecular Ecology Resources 9 ( 2 ) 610 - 612 2008.11

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DOI： 10.1111/j.1471-8286.2009.00228_9_2.x
Isolation and characterization of polymorphic trinucleotide and dinucleotide microsatellite loci for the ice goby, Leucopsarison petersii Reviewed

TOMOYUKI KOKITA, SAYAKA TAKAHASHI

Molecular Ecology Resources 8 ( 2 ) 305 - 307 2008.6

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DOI： 10.1111/j.1471-8286.2007.01936.x
Population genetic structure of the neon damselfish (Pomacentrus coelestis) in the northwestern Pacific Ocean Reviewed

Shang-Yin V. Liu, Tomoyuki Kokita, Chang-Feng Dai

Marine Biology 154 ( 4 ) 745 - 753 2008.6

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DOI： 10.1007/s00227-008-0967-2
Isolation and characterization of highly polymorphic microsatellite loci in a pelagic-spawning reef fish Hypodytes rubripinnis Reviewed

T. KOKITA, K. MATSUOKA, O. TOMINAGA, T. SEIKAI

Molecular Ecology Notes 6 ( 1 ) 210 - 211 2006.3

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DOI： 10.1111/j.1471-8286.2005.01195.x
Latitudinal compensation in female reproductive rate of a geographically widespread reef fish Reviewed

Tomoyuki Kokita

Environmental Biology of Fishes 71 ( 3 ) 213 - 224 2004.11

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DOI： 10.1007/s10641-003-0304-z
Potential latitudinal variation in egg size and number of a geographically widespread reef fish, revealed by common-environment experiments Reviewed

T. Kokita

Marine Biology 143 ( 3 ) 593 - 601 2003.9

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DOI： 10.1007/s00227-003-1104-x
Genetic comparison of two color-morphs of Apogon properuptus from southern Japan Reviewed

Kohji Mabuchi, Noboru Okuda, Tomoyuki Kokita, Mutsumi Nishida

Ichthyological Research 50 ( 3 ) 293 - 296 2003.8

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DOI： 10.1007/s10228-003-0171-9
Male secondary sexual traits are hydrodynamic devices for enhancing swimming performance in a monogamous filefish Paramonacanthus japonicus Reviewed

Tomoyuki Kokita, Taketo Mizota

Journal of Ethology 20 ( 1 ) 35 - 42 2002.6

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DOI： 10.1007/s10164-002-0051-1
The Role of Female Behavior in Maintaining Monogamy of a Coral-Reef Filefish Reviewed

Tomoyuki Kokita

Ethology 108 ( 2 ) 157 - 168 2002.2

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DOI： 10.1046/j.1439-0310.2002.00766.x
Bluff Body (Fundamental Problem & Vehicle) Reviewed

Takashi NOMURA, Yoji SUZUKI, Mutsumi UEMURA, Nobuyuki KOBAYASHI, Li Mingshui, Wang Weihua, Ni Zhangsong, Chen Xin, H. Kawai, K. Fujinami, Hiroaki NISHIMURA, Yoshihito TANIIKE, Tomoyuki Kokita, Taketo Mizota, Songpol PHONGKUMSING, Kichiro KIMURA, Yozo FUJINO, Minoru SUZUKI, Katsuji TANEMOTO, Tatsuo MAEDA

Wind Engineers, JAWE 2001 ( 89 ) 481 - 508 2001.10

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DOI： 10.5359/jawe.2001.89_481
Rapid response of an obligately corallivorous filefish Oxymonacanthus longirostris (Monacanthidae) to a mass coral bleaching event Reviewed

T. Kokita, A. Nakazono

Coral Reefs 20 ( 2 ) 155 - 158 2001.9

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DOI： 10.1007/s003380100153
Sexual conflict over mating system: the case of a pair-territorial filefish without parental care Reviewed

Tomoyuki Kokita, Akinobu Nakazono

Animal Behaviour 62 ( 1 ) 147 - 155 2001.7

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DOI： 10.1006/anbe.2001.1738
Seasonal variation in the diel spawning time of the coral reef fish Oxymonacanthus longirostris (Monacanthidae):parental control of progeny development Reviewed

T Kokita, A Nakazono

Marine Ecology Progress Series 199 263 - 270 2000.6

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DOI： 10.3354/meps199263
Spawning substrate selection by female longnose filefish,Oxymonacanthus longirostris Reviewed

Tomoyuki Kokita, Akinobu Nakazono

Ichthyological Research 46 ( 4 ) 429 - 432 1999.12

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DOI： 10.1007/bf02673987
Pair territoriality in the longnose filefish,Oxymonacanthus longirostris Reviewed

Tomoyuki Kokita, Akinobu Nakazono

Ichthyological Research 46 ( 3 ) 297 - 302 1999.9

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DOI： 10.1007/bf02678516
Long distance dispersal of larval and juvenile rockfish, Sebastes thompsoni, with drifting seaweed in the Tohoku area, northwest Pacific, estimated by analysis of otolith microstructure Reviewed

Tomoyuki Kokita, Michio Omori

Bulletin of Marine Science 65 ( 1 ) 105 - 118 1999.7

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Early life history traits of the gold-eye rockfish, Sebastes thompsoni , in relation to successful utilization of drifting seaweed Reviewed

T. Kokita, M. Omori

Marine Biology 132 ( 4 ) 579 - 589 1998.12

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DOI： 10.1007/s002270050423
Plasticity in the mating system of the longnose filefish,Oxymonacanthus longirostris, in relation to mate availability Reviewed

Tomoyuki Kokita, Akinobu Nakazono

Journal of Ethology 16 ( 2 ) 81 - 89 1998.9

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DOI： 10.1007/bf02769286

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Books

Fish diversity of Japan : evolution, zoogeography, and conservation

Tomoyuki Kokita、その他23名（Role：Joint author）

Springer 2022.1

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Responsible for pages：総ページ数：vi, 454 p. [chapter 14: Aaptive phenotypic divergence in fishes of Japan: potential model systems for ecological and evolutionary genomicsを執筆］ Language：English Book type：Scholarly book
魚類学の百科事典（一般社団法人日本魚類学会編）

小北智之

丸善出版 2018.10

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Responsible for pages：総ページ数：xxv, 718p, 図版 [8] p Language：Japanese
魚類行動生態学入門（桑村哲生，安房田智司編著）

小北智之

東海大学出版会 2013.11

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Responsible for pages：総ページ数：xii, 265p Language：Japanese
生態学事典（巌佐庸，松本忠夫，菊沢喜八郎，日本生態学会編）

小北智之

共立出版 2003.6

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Responsible for pages：総ページ数：xxi, 682p Language：Japanese
魚類の社会行動1（桑村哲生、狩野賢司編）

小北智之

海游舎 2001.11

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Responsible for pages：総ページ数：3冊 Language：Japanese

Presentations

イトヨの縄張り制における雌雄間相関進化の収斂性

上野若菜・山崎遥・森誠一・細木拓也・小北智之

第72回日本生態学会大会 2025.3

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Event date： 2025.3

Language：Japanese Presentation type：Poster presentation

Country：Japan
広域分布種クマノミにおける温帯個体群における局所適応

北井大陽・平瀬祥太朗・小北智之

第72回日本生態学会大会 2025.3

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Event date： 2025.3

Language：Japanese Presentation type：Poster presentation

Country：Japan
Genetic basis underlying diversification of caudal fin branching in three-spined sticklebacks International conference

Kouki Tamai, Haruka Yamzaki, Tomoyuki Kokita, Seiichi Mori, Jun Kitano, Asano Ishikawa

Gordon Research Conference -- Speciation 2025.2

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Event date： 2025.2

Language：English Presentation type：Poster presentation

Country：United States
トゲウオの分枝生物学

玉井滉基・山崎遥・小北智之・森誠一・北野潤・石川麻乃

第47回日本分子生物学会年会 2024.12

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Event date： 2024.12

Language：Japanese Presentation type：Oral presentation (general)

Venue：福岡 Country：Japan
イトヨにおける尾びれ鰭条の種内変異とその発生遺伝機構

玉井滉基・山崎遥・小北智之・森誠一・北野潤・石川麻乃

第95回日本動物学会大会 2024.9

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Event date： 2024.9

Language：Japanese Presentation type：Oral presentation (general)

Venue：長崎 Country：Japan
ナガミミズハゼ種群2種の共存域における微細生息環境特性の差異

潮上太郎・小北智之

2024年度日本魚類学会年会 2024.9

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Event date： 2024.9

Language：Japanese Presentation type：Poster presentation

Venue：福岡 Country：Japan
アミメハギにおける棘状鱗の性的二型とそのアンドロゲン依存性

小北智之

2024年度日本魚類学会年会 2024.9

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Event date： 2024.9

Language：Japanese Presentation type：Poster presentation

Venue：福岡 Country：Japan
Cis-regulatory evolution in behavior-related genes of anemonefishes in relation to host and environmental niche differentiation International conference

Haruka Yoshida, Shotaro Hirase, Tappei Mishina, Tomoyuki Kokita

3rd Joint Congress on Evolutionary Biology 2024.7

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Event date： 2024.7

Language：English Presentation type：Symposium, workshop panel (public)

Venue：Montréal Country：Canada
クマノミ温帯集団の低温適応進化に関わる遺伝子の探索

吉田陽香・平瀬祥太郎・小北智之

令和６年度日本水産学会春季大会 2024.3

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Event date： 2024.3

Language：Japanese Presentation type：Oral presentation (general)

Venue：東京 Country：Japan
Multiple hybrid zones of coastal marine gobies around the Japanese archipelago: natural laboratories for marine hybridization International conference

Shotaro Hirase, Shuya Kato, Tomoyuki Kokita

The 11th Indo-Pacific Fish Conference and the Australian Society for Fish Biology　２０２３ 2023.11

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Event date： 2023.11

Language：English Presentation type：Oral presentation (general)

Venue：Auckland Country：New Zealand

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MISC

日本魚類学会による『研究材料として魚類を使用する際のガイドライン』の紹介 Reviewed

小北智之

応用生態工学 2024.4

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Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)

DOI： doi.org/10.3825/ece.23-00018
魚の遺伝的な個体差を探る～養殖用の優良品種作出へ向けて～

小北智之

『水産増養殖と環境まちづくり』．福井県立大学編 2020.4

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Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
滋賀県ハリヨの危機 Reviewed

森　誠一, 小北智之, 松田征也

魚類学雑誌 2016.4

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Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
魚類における適応・種分化の進化遺伝機構：研究最前線と今後の展望 Reviewed

小北智之, 渡辺勝敏

魚類学雑誌 2015.4

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Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
エコゲノミクスにおける網羅的遺伝子発現解析—魚類での研究例から Reviewed

小北智之

生物科学 2013.4

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Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
自然集団の適応的分化の検出：モデル系としての日本在来魚

小北智之, 山平寿智

月刊海洋 2010.4

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Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)
サンゴの白化とサンゴ食魚類の未来

小北智之

みどりいし 2010.3

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Language：Japanese Publishing type：Article, review, commentary, editorial, etc. (scientific journal)

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Professional Memberships

公益社団法人日本水産学会
European Society for Evolutionary Biology
一般社団法人日本生態学会
日本動物行動学会
一般社団法人日本進化学会
一般社団法人日本魚類学会

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Committee Memberships

日本魚類学会 Councilor Domestic

2023.9 - Present
日本水産学会 Organizer Domestic

2020.4 - 2022.3
日本水産学会中部支部幹事 Domestic

2020.4 - 2022.3
日本魚類学会 Councilor Domestic

2017.9 - 2021.9
日本魚類学会代議員 Domestic

2017.9 - 2021.9
日本魚類学会 Organizer Domestic

2016.1 - 2017.9
日本魚類学会庶務幹事 Domestic

2016.1 - 2017.9

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Academic Activities

魚類学雑誌, 編集委員

2023.9 - Present

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Type：Academic society, research group, etc.
Ichthyological Research, Section Editor

2023.9 - Present

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Type：Academic society, research group, etc.
Ichthyological Research, Editor-in-Chief International contribution

2020.1 - 2023.9

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Type：Academic society, research group, etc.
魚類学雑誌, 編集長

2020.1 - 2023.9

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Type：Academic society, research group, etc.

Research Projects

ゲノム内分泌学から探る繁殖行動戦略の収斂進化機構

Grant number：24K21992 2024.7 - 2027.3

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research 挑戦的研究（萌芽）

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Authorship：Principal investigator Grant type：Scientific research funding
令和6年度博多湾生物指標モニタリング調査（藻場等）

2024.4 - 2025.3

Research commissions

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Authorship：Principal investigator Grant type：Contract research
令和5年度博多湾生物指標モニタリング調査（藻場等）

2023.4 - 2024.3

Research commissions

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Authorship：Principal investigator Grant type：Contract research
トゲウオ科魚類をモデルとした繁殖行動形質の適応的多様化のゲノム基盤

Grant number：21H02552 2021 - 2023

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)

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Authorship：Principal investigator Grant type：Scientific research funding
淡水魚類の保全ゲノミクス：自然史と危機診断を結ぶ枠組みの構築

Grant number：20H03009 2020 - 2022

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)

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Authorship：Coinvestigator(s) Grant type：Scientific research funding
タナゴ亜科魚類の種多様化を駆動する繁殖ニッチ分化の進化遺伝機構

Grant number：20K06784 2020 - 2022

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C)

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Authorship：Coinvestigator(s) Grant type：Scientific research funding
産卵回遊の分子生態メカニズム：嗅覚記憶仮説の検証

Grant number：19K22462 2019 - 2021

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Challenging Research(Exploratory)

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Authorship：Coinvestigator(s) Grant type：Scientific research funding
クマノミ類をモデル系とした海洋適応放散の進化遺伝機構

Grant number：18K06385 2018 - 2020

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C)

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Authorship：Principal investigator Grant type：Scientific research funding
交雑起源の新規集団のゲノム進化に関する包括的研究

Grant number：18H02493 2018 - 2020

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)

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Authorship：Coinvestigator(s) Grant type：Scientific research funding
古代湖・琵琶湖における湖沼適応の起源と集団ゲノミクス

Grant number：17H03720 2017 - 2019

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)

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Authorship：Coinvestigator(s) Grant type：Scientific research funding
タナゴ亜科魚類が獲得した新奇形質の適応的多様化機構

Grant number：16K07479 2016 - 2019

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C)

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Authorship：Coinvestigator(s) Grant type：Scientific research funding
性ホルモン依存的な雄の繁殖戦略多様化の進化遺伝機構：トゲウオ科魚類を例として

Grant number：15K07195 2015 - 2017

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C)

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Authorship：Principal investigator Grant type：Scientific research funding
温帯古代湖・琵琶湖の魚類群集における湖沼適応の実態と遺伝基盤の解明

Grant number：26291079 2014 - 2016

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)

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Authorship：Coinvestigator(s) Grant type：Scientific research funding
繁殖寄生と関連した卵形の適応進化機構：タナゴ亜科魚類を用いたエコゲノミクス

Grant number：25440206 2013 - 2015

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C)

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Authorship：Coinvestigator(s) Grant type：Scientific research funding
性ホルモンシグナリングの集団分化から探る魚類の繁殖システム多様化の遺伝基盤

Grant number：24570105 2012 - 2014

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C)

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Authorship：Principal investigator Grant type：Scientific research funding
非モデル魚における集団特異的適応遺伝子の検出:網羅的遺伝子発現解析と自然選択解析

Grant number：22780180 2010 - 2011

Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists(A)or(B)

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Authorship：Principal investigator Grant type：Scientific research funding
種内表現型多型のスケールアップ効果:湖沼生態系に与える影響の実験的検証

Grant number：20370009 2008 - 2011

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (B)

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Authorship：Coinvestigator(s) Grant type：Scientific research funding
魚類資源における日本海―太平洋間の適応的分化の検出:エコゲノミクス解析

Grant number：20780139 2008 - 2009

Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists(A)or(B)

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Authorship：Principal investigator Grant type：Scientific research funding
浅海魚類資源における適応的形質の緯度間変異に関する生態遺伝学的研究

Grant number：17780156 2005 - 2007

Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists(A)or(B)

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Authorship：Principal investigator Grant type：Scientific research funding
海産魚類の繁殖形質における地域的適応の検出

Grant number：00J00307 2000 - 2002

Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research Grant-in-Aid for JSPS Fellows

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Authorship：Principal investigator Grant type：Scientific research funding

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Class subject

魚類学Ⅱ

2024.12 - 2025.2 Winter quarter
水産生物学実験

2024.10 - 2025.2 Second semester
農学入門Ⅱ

2024.10 - 2025.2 Second semester
動物生産科学概論

2024.10 - 2025.2 Second semester
魚類学Ⅰ

2024.10 - 2024.12 Fall quarter
水産資源増殖学特論

2024.10 - 2024.12 Fall quarter
生物統計解析

2024.10 - 2024.12 Fall quarter
水産増殖学

2024.6 - 2024.8 Summer quarter
Environmental and Ecological Science for Animal ProductionⅡ

2024.6 - 2024.8 Summer quarter
卒業研究

2024.4 - 2025.2 Full year
国際演示技法（博士後期）

2024.4 - 2025.2 Full year
プロジェクト演習

2024.4 - 2025.2 Full year
動物・海洋生物科学特別演習

2024.4 - 2025.2 Full year
動物・海洋生物科学特別講究

2024.4 - 2025.2 Full year
動物・海洋生物科学特別実験

2024.4 - 2025.2 Full year
国際演示技法（修士）

2024.4 - 2025.2 Full year
演示技法Ⅱ

2024.4 - 2025.2 Full year
演示技法Ⅰ

2024.4 - 2025.2 Full year
動物・海洋生物科学ティーティング演習

2024.4 - 2025.2 Full year
動物・海洋生物科学プロジェクト演習

2024.4 - 2025.2 Second semester
動物・海洋生物科学特別研究第二

2024.4 - 2025.2 Full year
動物・海洋生物科学特別演習第二

2024.4 - 2025.2 Full year
動物・海洋生物科学特別研究第一

2024.4 - 2025.2 Full year
動物・海洋生物科学特別演習第一

2024.4 - 2025.2 Full year
動物・水圏資源保全学

2024.4 - 2025.2 Spring quarter
動物学標本実習

2024.4 - 2025.2 Full year
農学入門Ⅱ

2024.4 - 2024.8 First semester
科学英語

2024.4 - 2024.8 First semester
水産科学のフロンティア

2024.4 - 2024.6 Spring quarter
魚類学Ⅱ

2023.12 - 2024.2 Winter quarter
水産生物学実験

2023.10 - 2024.2 Second semester
動物・海洋生物科学プロジェクト演習

2023.10 - 2024.2 Second semester
課題協学科目

2023.10 - 2024.2 Second semester
農学入門Ⅱ（後期）

2023.10 - 2024.2 Second semester
動物生産科学概論

2023.10 - 2024.2 Second semester
魚類学Ⅰ

2023.10 - 2023.12 Fall quarter
水産資源増殖学特論

2023.10 - 2023.12 Fall quarter
生物統計解析

2023.10 - 2023.12 Fall quarter
水産増殖学

2023.6 - 2023.8 Summer quarter
Environmental and Ecological Science for Animal ProductionⅡ

2023.6 - 2023.8 Summer quarter
卒業研究

2023.4 - 2024.2 Full year
プロジェクト演習

2023.4 - 2024.2 Full year
ティーチング演習

2023.4 - 2024.2 Full year
動物・海洋生物科学特別演習

2023.4 - 2024.2 Full year
動物・海洋生物科学特別講究

2023.4 - 2024.2 Full year
動物・海洋生物科学特別実験

2023.4 - 2024.2 Full year
演示技法Ⅱ

2023.4 - 2024.2 Full year
演示技法Ⅰ

2023.4 - 2024.2 Full year
動物・海洋生物科学ティーティング演習

2023.4 - 2024.2 Full year
動物・海洋生物科学特別研究第二

2023.4 - 2024.2 Full year
動物・海洋生物科学特別演習第二

2023.4 - 2024.2 Full year
動物・海洋生物科学特別研究第一

2023.4 - 2024.2 Full year
動物・海洋生物科学特別演習第一

2023.4 - 2024.2 Full year
動物学標本実習

2023.4 - 2024.2 Full year
農学入門Ⅱ（前期）

2023.4 - 2023.8 First semester
科学英語

2023.4 - 2023.8 First semester
水産科学のフロンティア

2023.4 - 2023.6 Spring quarter
動物・水圏資源保全学

2023.4 - 2023.6 Spring quarter
魚類学Ⅱ

2022.12 - 2023.2 Winter quarter
水産生物学実験Ⅱ

2022.10 - 2023.2 Second semester
農学入門Ⅱ(後期）

2022.10 - 2023.2 Second semester
動物生産科学概論

2022.10 - 2023.2 Second semester
乗船実習Ⅱ

2022.10 - 2023.2 Second semester
動物・海洋生物科学プロジェクト演習

2022.10 - 2023.2 Second semester
魚類学Ⅰ

2022.10 - 2022.12 Fall quarter
水産資源増殖学特論

2022.10 - 2022.12 Fall quarter
水産増殖学

2022.6 - 2022.8 Summer quarter
Environmental and Ecological Science for Animal Production

2022.6 - 2022.8 Summer quarter
卒業研究

2022.4 - 2023.2 Full year
動物・海洋生物科学特別演習第二

2022.4 - 2023.2 Full year
動物学標本実習

2022.4 - 2023.2 Full year
動物・海洋生物科学特別研究第二

2022.4 - 2023.2 Full year
演示技法Ⅱ

2022.4 - 2023.2 Full year
演示技法Ⅰ

2022.4 - 2023.2 Full year
動物・海洋生物科学ティーティング演習

2022.4 - 2023.2 Full year
農学入門Ⅱ（前期）

2022.4 - 2022.8 First semester
水産増殖学実験

2022.4 - 2022.8 First semester
科学英語

2022.4 - 2022.8 First semester
水産科学のフロンティア

2022.4 - 2022.6 Spring quarter
動物・水圏資源保全学

2022.4 - 2022.6 Spring quarter
魚類学Ⅱ

2021.12 - 2022.2 Winter quarter
水産増殖学

2021.10 - 2022.2 Second semester
水産生物学実験Ⅱ

2021.10 - 2022.2 Second semester
動物生産科学概論

2021.10 - 2022.2 Second semester
農学入門Ⅱ（後期）

2021.10 - 2022.2 Second semester
魚類学Ⅰ

2021.10 - 2021.12 Fall quarter

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Visiting, concurrent, or part-time lecturers at other universities, institutions, etc.

2022 神戸大学大学院理学研究科 Classification:Part-time lecturer Domestic/International Classification:Japan

Semester, Day Time or Duration：２０２２年度、前期（集中講義）
2021 福井県立大学海洋生物資源学部 Classification:Part-time lecturer Domestic/International Classification:Japan

Semester, Day Time or Duration：2022年度、後期